Analysis of interatomic Contacts of Structural Units in PDB entry:
4ATY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4ATY entry

There is 1 chain in PDB entry 4ATY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 11ALA 349
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 15 helices in PDB entry 4ATY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
25 36Right-handed alpha
Helix 2
2
A
61 73Right-handed alpha
Helix 3
3
A
103 107Right-handed 310
Helix 4
4
A
113 133Right-handed alpha
Helix 5
5
A
145 153Right-handed alpha
Helix 6
6
A
158 167Right-handed alpha
Helix 7
7
A
170 174Right-handed 310
Helix 8
8
A
193 201Right-handed alpha
Helix 9
9
A
202 220Right-handed alpha
Helix 10
10
A
233 238Right-handed 310
Helix 11
11
A
244 249Right-handed alpha
Helix 12
12
A
249 260Right-handed alpha
Helix 13
13
A
269 274Right-handed alpha
Helix 14
14
A
286 299Right-handed alpha
Helix 15
15
A
332 345Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 4ATY. Click on sheet of interest to get list of strands forming it: AA, AB,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
79 80first strand
Strand 2
A
95 98parallel
Strand 3
A
57 60parallel
Strand 4
A
15 18parallel
Strand 5
A
138 141parallel
Strand 6
A
312 315parallel
Back to list of sheets
Back to top of page

There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
264 268first strand
Strand 2
A
227 230parallel
Strand 3
A
281 284parallel
Strand 4
A
183 187parallel
Strand 5
A
175 180anti-parallel
Strand 6
A
302 307anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il