Analysis of interatomic Contacts of Structural Units in PDB entry:
4AUI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4AUI entry

There are 6 chains in PDB entry 4AUI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 1PHE 308
B
 ASP 1PHE 308
C
 ASP 1PHE 308
D
 ALA 400ALA 407
E
 ALA 401ALA 408
F
 ALA 402ALA 408
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There is 1 helix in PDB entry 4AUI. Click on helix number for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
B
95 101Right-handed alpha
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There are 3 sheets in PDB entry 4AUI. Click on sheet of interest to get list of strands forming it: AA, BA, CA,

There are 17 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 21first strand
Strand 2
A
40 47anti-parallel
Strand 3
A
54 62anti-parallel
Strand 4
A
78 83anti-parallel
Strand 5
A
86 94anti-parallel
Strand 6
A
124 135anti-parallel
Strand 7
A
138 145anti-parallel
Strand 8
A
157 165anti-parallel
Strand 9
A
169 178anti-parallel
Strand 10
A
185 198anti-parallel
Strand 11
A
201 214anti-parallel
Strand 12
A
221 234anti-parallel
Strand 13
A
242 248anti-parallel
Strand 14
A
262 272anti-parallel
Strand 15
A
277 289anti-parallel
Strand 16
A
293 308anti-parallel
Strand 17
A
2 21parallel
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There are 17 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 19first strand
Strand 2
B
40 47anti-parallel
Strand 3
B
54 62anti-parallel
Strand 4
B
78 82anti-parallel
Strand 5
B
87 94anti-parallel
Strand 6
B
124 135anti-parallel
Strand 7
B
138 145anti-parallel
Strand 8
B
157 165anti-parallel
Strand 9
B
169 181anti-parallel
Strand 10
B
184 198anti-parallel
Strand 11
B
201 214anti-parallel
Strand 12
B
221 234anti-parallel
Strand 13
B
242 248anti-parallel
Strand 14
B
262 272anti-parallel
Strand 15
B
277 289anti-parallel
Strand 16
B
294 308anti-parallel
Strand 17
B
2 19parallel
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There are 17 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
2 19first strand
Strand 2
C
40 47anti-parallel
Strand 3
C
54 62anti-parallel
Strand 4
C
78 82anti-parallel
Strand 5
C
87 94anti-parallel
Strand 6
C
124 135anti-parallel
Strand 7
C
138 145anti-parallel
Strand 8
C
157 165anti-parallel
Strand 9
C
169 181anti-parallel
Strand 10
C
184 198anti-parallel
Strand 11
C
201 214anti-parallel
Strand 12
C
221 234anti-parallel
Strand 13
C
242 248anti-parallel
Strand 14
C
262 272anti-parallel
Strand 15
C
277 289anti-parallel
Strand 16
C
294 308anti-parallel
Strand 17
C
2 19parallel
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