Analysis of interatomic Contacts of Structural Units in PDB entry:
4AWE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4AWE entry

There is 1 chain in PDB entry 4AWE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 5ARG 387
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 4AWE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
30 34Right-handed 310
Helix 2
2
A
35 49Right-handed alpha
Helix 3
3
A
100 102Right-handed 310
Helix 4
4
A
103 114Right-handed alpha
Helix 5
5
A
130 138Right-handed alpha
Helix 6
6
A
144 149Right-handed alpha
Helix 7
7
A
149 168Right-handed alpha
Helix 8
8
A
200 219Right-handed alpha
Helix 9
9
A
250 256Right-handed alpha
Helix 10
10
A
268 273Right-handed alpha
Helix 11
11
A
275 294Right-handed alpha
Helix 12
12
A
306 315Right-handed alpha
Helix 13
13
A
321 337Right-handed alpha
Helix 14
14
A
369 374Right-handed alpha
Helix 15
15
A
374 386Right-handed alpha
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There are 4 sheets in PDB entry 4AWE. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD,

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 10first strand
Strand 2
A
13 16anti-parallel
Strand 3
A
19 20anti-parallel
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There are 8 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
223 225first strand
Strand 2
A
173 177parallel
Strand 3
A
116 120parallel
Strand 4
A
53 57parallel
Strand 5
A
23 27parallel
Strand 6
A
340 343parallel
Strand 7
A
297 302parallel
Strand 8
A
263 267parallel
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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 63first strand
Strand 2
A
88 90parallel
Strand 3
A
96 98anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
346 347first strand
Strand 2
A
363 364parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il