Analysis of interatomic Contacts of Structural Units in PDB entry:
4AX0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4AX0 entry

There is 1 chain in PDB entry 4AX0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ALA 28SER 312
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 4AX0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
B
91 102Right-handed alpha
Helix 2
2
B
105 107Right-handed 310
Helix 3
3
B
118 123Right-handed alpha
Helix 4
4
B
124 133Right-handed alpha
Helix 5
5
B
142 149Right-handed alpha
Helix 6
6
B
157 161Right-handed 310
Helix 7
7
B
232 236Right-handed 310
Helix 8
8
B
238 252Right-handed alpha
Helix 9
9
B
263 268Right-handed 310
Helix 10
10
B
268 272Right-handed 310
Helix 11
11
B
288 310Right-handed alpha
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There are 3 sheets in PDB entry 4AX0. Click on sheet of interest to get list of strands forming it: BA, BB, BC,

There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
45 49first strand
Strand 2
B
52 54anti-parallel
Strand 3
B
71 73anti-parallel
Strand 4
B
80 83anti-parallel
Strand 5
B
109 113parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
136 139first strand
Strand 2
B
171 174parallel
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There are 5 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
179 182first strand
Strand 2
B
185 191anti-parallel
Strand 3
B
201 209anti-parallel
Strand 4
B
212 218anti-parallel
Strand 5
B
258 260parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il