Analysis of interatomic Contacts of Structural Units in PDB entry:
4B0N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4B0N entry

There are 2 chains in PDB entry 4B0N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 36ILE 414
B
 LYS 36ILE 414
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 4B0N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
59 69Right-handed alpha
Helix 2
2
A
70 73Right-handed 310
Helix 3
3
A
75 77Right-handed 310
Helix 4
4
A
78 85Right-handed alpha
Helix 5
5
A
95 99Right-handed 310
Helix 6
6
A
120 147Right-handed alpha
Helix 7
7
A
150 152Right-handed 310
Helix 8
8
A
169 178Right-handed alpha
Helix 9
9
A
192 194Right-handed 310
Helix 10
10
A
195 211Right-handed alpha
Helix 11
11
A
225 227Right-handed 310
Helix 12
12
A
233 243Right-handed alpha
Helix 13
13
A
298 317Right-handed alpha
Helix 14
14
A
321 325Right-handed 310
Helix 15
15
A
334 346Right-handed alpha
Helix 16
16
A
352 363Right-handed alpha
Helix 17
17
A
368 386Right-handed alpha
Helix 18
18
B
59 69Right-handed alpha
Helix 19
19
B
71 74Right-handed 310
Helix 20
20
B
75 85Right-handed alpha
Helix 21
21
B
95 99Right-handed 310
Helix 22
22
B
99 103Right-handed 310
Helix 23
23
B
120 147Right-handed alpha
Helix 24
24
B
150 152Right-handed 310
Helix 25
25
B
169 179Right-handed alpha
Helix 26
26
B
192 194Right-handed 310
Helix 27
27
B
195 211Right-handed alpha
Helix 28
28
B
225 227Right-handed 310
Helix 29
29
B
233 240Right-handed alpha
Helix 30
30
B
298 317Right-handed alpha
Helix 31
31
B
321 325Right-handed 310
Helix 32
32
B
334 346Right-handed alpha
Helix 33
33
B
352 362Right-handed alpha
Helix 34
34
B
368 387Right-handed alpha
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There are 8 sheets in PDB entry 4B0N. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA, BB, BC, BD,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 51first strand
Strand 2
A
245 255anti-parallel
Strand 3
A
215 223anti-parallel
Strand 4
A
154 161parallel
Strand 5
A
185 190parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 58first strand
Strand 2
A
90 93anti-parallel
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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
265 274first strand
Strand 2
A
405 413anti-parallel
Strand 3
A
394 401anti-parallel
Strand 4
A
327 330parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
282 287first strand
Strand 2
A
290 295anti-parallel
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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
42 51first strand
Strand 2
B
245 255anti-parallel
Strand 3
B
215 223anti-parallel
Strand 4
B
154 161parallel
Strand 5
B
185 190parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
55 58first strand
Strand 2
B
90 93anti-parallel
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There are 4 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
265 274first strand
Strand 2
B
405 413anti-parallel
Strand 3
B
394 401anti-parallel
Strand 4
B
327 330parallel
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There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
282 287first strand
Strand 2
B
290 295anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il