Analysis of interatomic Contacts of Structural Units in PDB entry:
4B1M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4B1M entry

There are 3 chains in PDB entry 4B1M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 513SER 677
B
 THR 515SER 677
C
 PRO 517SER 677
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page
There are no helices in PDB entry 4B1M

There are 11 sheets in PDB entry 4B1M. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, CA, AF, BA, BB, BC, BD,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
526 527first strand
Strand 2
A
538 555parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
531 535first strand
Strand 2
A
538 555anti-parallel
Back to list of sheets
Back to top of page

There are 16 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
644 650first strand
Strand 2
A
636 641anti-parallel
Strand 3
A
626 633anti-parallel
Strand 4
A
558 581anti-parallel
Strand 5
A
588 594anti-parallel
Strand 6
A
599 606anti-parallel
Strand 7
A
609 617anti-parallel
Strand 8
C
609 617anti-parallel
Strand 9
C
599 606anti-parallel
Strand 10
C
588 594anti-parallel
Strand 11
C
574 581anti-parallel
Strand 12
C
657 676anti-parallel
Strand 13
C
558 566anti-parallel
Strand 14
C
626 633anti-parallel
Strand 15
C
636 641anti-parallel
Strand 16
C
644 650anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
644 650first strand
Strand 2
A
636 641anti-parallel
Strand 3
A
626 633anti-parallel
Strand 4
A
558 581anti-parallel
Strand 5
A
657 676anti-parallel
Strand 6
A
538 555anti-parallel
Strand 7
A
531 535anti-parallel
Back to list of sheets
Back to top of page

There are 14 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
644 650first strand
Strand 2
A
636 641anti-parallel
Strand 3
A
626 633anti-parallel
Strand 4
A
558 581anti-parallel
Strand 5
A
588 594anti-parallel
Strand 6
A
599 606anti-parallel
Strand 7
A
609 617anti-parallel
Strand 8
C
609 617anti-parallel
Strand 9
C
599 606anti-parallel
Strand 10
C
588 594anti-parallel
Strand 11
C
574 581anti-parallel
Strand 12
C
657 676anti-parallel
Strand 13
C
538 555parallel
Strand 14
C
531 535parallel
Back to list of sheets
Back to top of page

There are 2 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
526 529first strand
Strand 2
C
538 555parallel
Back to list of sheets
Back to top of page

There are 7 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
644 650first strand
Strand 2
A
636 641anti-parallel
Strand 3
A
626 633anti-parallel
Strand 4
A
558 581anti-parallel
Strand 5
A
657 676anti-parallel
Strand 6
A
538 555anti-parallel
Strand 7
A
526 527anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
526 527first strand
Strand 2
B
538 555parallel
Back to list of sheets
Back to top of page

There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
531 535first strand
Strand 2
B
538 555parallel
Back to list of sheets
Back to top of page

There are 9 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
609 617first strand
Strand 2
B
599 606anti-parallel
Strand 3
B
588 594anti-parallel
Strand 4
B
574 581anti-parallel
Strand 5
B
657 676anti-parallel
Strand 6
B
558 566anti-parallel
Strand 7
B
626 633anti-parallel
Strand 8
B
636 641anti-parallel
Strand 9
B
644 650anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
609 617first strand
Strand 2
B
599 606anti-parallel
Strand 3
B
588 594anti-parallel
Strand 4
B
574 581anti-parallel
Strand 5
B
657 676anti-parallel
Strand 6
B
538 555anti-parallel
Strand 7
B
531 535parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il