Analysis of interatomic Contacts of Structural Units in PDB entry:
4B29


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4B29 entry

There is 1 chain in PDB entry 4B29 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2GLN 196
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 4B29. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 21Right-handed alpha
Helix 2
2
A
21 28Right-handed alpha
Helix 3
3
A
45 53Right-handed alpha
Helix 4
4
A
61 72Right-handed alpha
Helix 5
5
A
73 75Right-handed 310
Helix 6
6
A
82 87Right-handed alpha
Helix 7
7
A
87 93Right-handed alpha
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There are 2 sheets in PDB entry 4B29. Click on sheet of interest to get list of strands forming it: AA, AB,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 36first strand
Strand 2
A
106 107anti-parallel
Strand 3
A
94 101parallel
Strand 4
A
112 118anti-parallel
Strand 5
A
177 184anti-parallel
Strand 6
A
132 140anti-parallel
Strand 7
A
159 162anti-parallel
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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
152 154first strand
Strand 2
A
142 146anti-parallel
Strand 3
A
168 171anti-parallel
Strand 4
A
123 128anti-parallel
Strand 5
A
193 194anti-parallel
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