Analysis of interatomic Contacts of Structural Units in PDB entry:
4B47


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4B47 entry

There is 1 chain in PDB entry 4B47 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2PRO 355
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 4B47. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 13Right-handed alpha
Helix 2
2
A
16 28Right-handed alpha
Helix 3
3
A
39 66Right-handed alpha
Helix 4
4
A
85 95Right-handed alpha
Helix 5
5
A
158 171Right-handed alpha
Helix 6
6
A
188 199Right-handed alpha
Helix 7
7
A
204 207Right-handed 310
Helix 8
8
A
222 238Right-handed alpha
Helix 9
9
A
328 347Right-handed alpha
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There are 4 sheets in PDB entry 4B47. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 5first strand
Strand 2
A
37 38anti-parallel
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There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
112 117first strand
Strand 2
A
120 125anti-parallel
Strand 3
A
75 79parallel
Strand 4
A
146 152parallel
Strand 5
A
174 180parallel
Strand 6
A
211 214parallel
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There are 7 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
248 257first strand
Strand 2
A
261 270anti-parallel
Strand 3
A
307 313anti-parallel
Strand 4
A
284 292anti-parallel
Strand 5
A
278 281anti-parallel
Strand 6
A
322 326anti-parallel
Strand 7
A
248 257anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
273 274first strand
Strand 2
A
301 302anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il