Analysis of interatomic Contacts of Structural Units in PDB entry:
4B54


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4B54 entry

There are 2 chains in PDB entry 4B54 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 58TYR 182
B
 SER 59GLU 183
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 4B54

There are 2 sheets in PDB entry 4B54. Click on sheet of interest to get list of strands forming it: AA, AB,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
171 180first strand
Strand 2
A
158 166anti-parallel
Strand 3
A
142 153anti-parallel
Strand 4
A
126 137anti-parallel
Strand 5
A
108 119anti-parallel
Strand 6
A
92 97anti-parallel
Strand 7
A
82 86anti-parallel
Strand 8
A
60 70anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
171 180first strand
Strand 2
A
60 70anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il