Analysis of interatomic Contacts of Structural Units in PDB entry:
4B6L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4B6L entry

There is 1 chain in PDB entry 4B6L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 52PRO 332
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 13 helices in PDB entry 4B6L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
96 99Right-handed 310
Helix 2
2
A
100 115Right-handed alpha
Helix 3
3
A
146 155Right-handed alpha
Helix 4
4
A
158 179Right-handed alpha
Helix 5
5
A
187 189Right-handed 310
Helix 6
6
A
228 233Right-handed alpha
Helix 7
7
A
238 256Right-handed alpha
Helix 8
8
A
264 274Right-handed alpha
Helix 9
9
A
284 295Right-handed alpha
Helix 10
10
A
298 302Right-handed 310
Helix 11
11
A
304 310Right-handed alpha
Helix 12
12
A
311 316Right-handed alpha
Helix 13
13
A
324 329Right-handed 310
Back to top of page

There are 3 sheets in PDB entry 4B6L. Click on sheet of interest to get list of strands forming it: AA, AB, AC,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 54first strand
Strand 2
A
62 69anti-parallel
Strand 3
A
75 81anti-parallel
Strand 4
A
87 94anti-parallel
Strand 5
A
134 139anti-parallel
Strand 6
A
125 130anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
181 182first strand
Strand 2
A
208 209anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
191 193first strand
Strand 2
A
199 201anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il