Analysis of interatomic Contacts of Structural Units in PDB entry:
4B7V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4B7V entry

There are 2 chains in PDB entry 4B7V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2ALA 413
B
 ARG 4ALA 413
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 4B7V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
21 31Right-handed alpha
Helix 2
2
A
64 71Right-handed alpha
Helix 3
3
A
73 90Right-handed alpha
Helix 4
4
A
94 97Right-handed 310
Helix 5
5
A
111 125Right-handed alpha
Helix 6
6
A
127 129Right-handed 310
Helix 7
7
A
133 137Right-handed 310
Helix 8
8
A
142 151Right-handed alpha
Helix 9
9
A
165 181Right-handed alpha
Helix 10
10
A
196 207Right-handed alpha
Helix 11
11
A
244 251Right-handed alpha
Helix 12
12
A
277 292Right-handed alpha
Helix 13
13
A
309 323Right-handed alpha
Helix 14
14
A
325 330Right-handed 310
Helix 15
15
A
335 340Right-handed alpha
Helix 16
16
A
343 361Right-handed alpha
Helix 17
17
B
21 31Right-handed alpha
Helix 18
18
B
64 71Right-handed alpha
Helix 19
19
B
73 90Right-handed alpha
Helix 20
20
B
94 97Right-handed 310
Helix 21
21
B
111 125Right-handed alpha
Helix 22
22
B
127 129Right-handed 310
Helix 23
23
B
133 137Right-handed 310
Helix 24
24
B
142 151Right-handed alpha
Helix 25
25
B
165 181Right-handed alpha
Helix 26
26
B
196 207Right-handed alpha
Helix 27
27
B
244 251Right-handed alpha
Helix 28
28
B
277 292Right-handed alpha
Helix 29
29
B
309 323Right-handed alpha
Helix 30
30
B
325 330Right-handed 310
Helix 31
31
B
335 340Right-handed alpha
Helix 32
32
B
343 361Right-handed alpha
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There are 2 sheets in PDB entry 4B7V. Click on sheet of interest to get list of strands forming it: A, B,

There are 14 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
156 162first strand
Strand 2
A
101 108first strand
Strand 3
A
184 194first strand
Strand 4
A
228 243first strand
Strand 5
A
5 15first strand
Strand 6
A
255 266first strand
Strand 7
A
403 411first strand
Strand 8
A
391 400first strand
Strand 9
A
299 304first strand
Strand 10
A
331 334first strand
Strand 11
A
34 39first strand
Strand 12
A
49 54first strand
Strand 13
A
362 367first strand
Strand 14
A
383 389first strand
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There are 14 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
156 162first strand
Strand 2
B
101 108first strand
Strand 3
B
184 194first strand
Strand 4
B
228 243first strand
Strand 5
B
5 15first strand
Strand 6
B
255 266first strand
Strand 7
B
403 411first strand
Strand 8
B
391 400first strand
Strand 9
B
299 304first strand
Strand 10
B
331 334first strand
Strand 11
B
34 39first strand
Strand 12
B
49 54first strand
Strand 13
B
362 367first strand
Strand 14
B
383 389first strand
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il