Analysis of interatomic Contacts of Structural Units in PDB entry:
4B7W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4B7W entry

There are 4 chains in PDB entry 4B7W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 175GLY 376
B
 ARG 177GLY 376
C
 ASP 175GLY 376
D
 ARG 177GLY 376
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 50 helices in PDB entry 4B7W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
185 198Right-handed alpha
Helix 2
2
A
198 203Right-handed alpha
Helix 3
3
A
205 210Right-handed alpha
Helix 4
4
A
212 217Right-handed alpha
Helix 5
5
A
223 235Right-handed alpha
Helix 6
6
A
255 259Right-handed 310
Helix 7
7
A
261 272Right-handed alpha
Helix 8
8
A
272 279Right-handed alpha
Helix 9
9
A
282 293Right-handed alpha
Helix 10
10
A
304 325Right-handed alpha
Helix 11
11
A
332 339Right-handed alpha
Helix 12
12
A
340 361Right-handed alpha
Helix 13
13
A
367 372Right-handed alpha
Helix 14
14
B
183 194Right-handed alpha
Helix 15
15
B
195 204Right-handed alpha
Helix 16
16
B
205 210Right-handed alpha
Helix 17
17
B
212 221Right-handed alpha
Helix 18
18
B
223 235Right-handed alpha
Helix 19
19
B
255 259Right-handed 310
Helix 20
20
B
261 272Right-handed alpha
Helix 21
21
B
272 280Right-handed alpha
Helix 22
22
B
283 295Right-handed alpha
Helix 23
23
B
304 324Right-handed alpha
Helix 24
24
B
334 339Right-handed alpha
Helix 25
25
B
340 375Right-handed alpha
Helix 26
26
C
185 198Right-handed alpha
Helix 27
27
C
198 203Right-handed alpha
Helix 28
28
C
205 210Right-handed alpha
Helix 29
29
C
212 217Right-handed alpha
Helix 30
30
C
223 235Right-handed alpha
Helix 31
31
C
255 259Right-handed 310
Helix 32
32
C
261 272Right-handed alpha
Helix 33
33
C
272 279Right-handed alpha
Helix 34
34
C
282 293Right-handed alpha
Helix 35
35
C
304 325Right-handed alpha
Helix 36
36
C
332 339Right-handed alpha
Helix 37
37
C
340 361Right-handed alpha
Helix 38
38
C
367 372Right-handed alpha
Helix 39
39
D
183 194Right-handed alpha
Helix 40
40
D
195 204Right-handed alpha
Helix 41
41
D
205 210Right-handed alpha
Helix 42
42
D
212 221Right-handed alpha
Helix 43
43
D
223 235Right-handed alpha
Helix 44
44
D
255 259Right-handed 310
Helix 45
45
D
261 272Right-handed alpha
Helix 46
46
D
272 280Right-handed alpha
Helix 47
47
D
283 295Right-handed alpha
Helix 48
48
D
304 324Right-handed alpha
Helix 49
49
D
334 339Right-handed alpha
Helix 50
50
D
340 375Right-handed alpha
Back to top of page

There is 1 sheet ( A) in PDB entry 4B7W.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
244 245first strand
Strand 2
D
248 250anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il