Analysis of interatomic Contacts of Structural Units in PDB entry:
4B8C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4B8C entry

There are 12 chains in PDB entry 4B8C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 149GLY 428
B
 GLN 759THR 991
C
 PRO 149GLY 428
D
 VAL 134PRO 820
E
 PRO 149GLY 428
F
 PRO 149GLY 428
G
 GLN 759THR 991
H
 GLN 759THR 991
I
 GLN 759THR 991
J
 VAL 134PRO 468
K
 VAL 134PRO 820
L
 VAL 134PRO 468
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are158 helices in PDB entry 4B8C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
154 158Right-handed 310
Helix 2
2
A
167 179Right-handed alpha
Helix 3
3
A
204 220Right-handed alpha
Helix 4
4
A
251 255Right-handed 310
Helix 5
5
A
258 269Right-handed alpha
Helix 6
6
A
271 278Right-handed alpha
Helix 7
7
A
281 292Right-handed alpha
Helix 8
8
A
307 320Right-handed alpha
Helix 9
9
A
326 338Right-handed alpha
Helix 10
10
A
344 353Right-handed alpha
Helix 11
11
A
372 381Right-handed alpha
Helix 12
12
A
385 389Right-handed 310
Helix 13
13
A
390 409Right-handed alpha
Helix 14
14
A
419 423Right-handed 310
Helix 15
15
B
782 795Right-handed alpha
Helix 16
16
B
800 812Right-handed alpha
Helix 17
17
B
813 815Right-handed 310
Helix 18
18
B
816 828Right-handed alpha
Helix 19
19
B
832 834Right-handed 310
Helix 20
20
B
835 847Right-handed alpha
Helix 21
21
B
848 869Right-handed alpha
Helix 22
22
B
871 875Right-handed 310
Helix 23
23
B
876 891Right-handed alpha
Helix 24
24
B
892 895Right-handed 310
Helix 25
25
B
904 915Right-handed alpha
Helix 26
26
B
917 930Right-handed alpha
Helix 27
27
B
931 935Right-handed 310
Helix 28
28
B
942 959Right-handed alpha
Helix 29
29
B
962 976Right-handed alpha
Helix 30
30
C
154 158Right-handed 310
Helix 31
31
C
167 179Right-handed alpha
Helix 32
32
C
204 220Right-handed alpha
Helix 33
33
C
251 255Right-handed 310
Helix 34
34
C
258 269Right-handed alpha
Helix 35
35
C
271 278Right-handed alpha
Helix 36
36
C
281 292Right-handed alpha
Helix 37
37
C
307 320Right-handed alpha
Helix 38
38
C
326 338Right-handed alpha
Helix 39
39
C
344 353Right-handed alpha
Helix 40
40
C
372 381Right-handed alpha
Helix 41
41
C
385 389Right-handed 310
Helix 42
42
C
390 409Right-handed alpha
Helix 43
43
C
419 423Right-handed 310
Helix 44
44
D
142 147Right-handed 310
Helix 45
45
D
154 170Right-handed alpha
Helix 46
46
D
175 187Right-handed alpha
Helix 47
47
D
244 259Right-handed alpha
Helix 48
48
D
350 356Right-handed 310
Helix 49
49
D
373 380Right-handed 310
Helix 50
50
D
398 403Right-handed 310
Helix 51
51
D
440 461Right-handed alpha
Helix 52
52
D
514 518Right-handed 310
Helix 53
53
D
527 532Right-handed alpha
Helix 54
54
D
532 547Right-handed alpha
Helix 55
55
D
558 564Right-handed alpha
Helix 56
56
D
799 804Right-handed alpha
Helix 57
57
E
154 158Right-handed 310
Helix 58
58
E
167 179Right-handed alpha
Helix 59
59
E
204 220Right-handed alpha
Helix 60
60
E
251 255Right-handed 310
Helix 61
61
E
258 269Right-handed alpha
Helix 62
62
E
271 278Right-handed alpha
Helix 63
63
E
281 292Right-handed alpha
Helix 64
64
E
307 320Right-handed alpha
Helix 65
65
E
326 338Right-handed alpha
Helix 66
66
E
344 353Right-handed alpha
Helix 67
67
E
372 381Right-handed alpha
Helix 68
68
E
385 389Right-handed 310
Helix 69
69
E
390 409Right-handed alpha
Helix 70
70
E
419 423Right-handed 310
Helix 71
71
F
154 158Right-handed 310
Helix 72
72
F
167 179Right-handed alpha
Helix 73
73
F
204 220Right-handed alpha
Helix 74
74
F
251 255Right-handed 310
Helix 75
75
F
258 269Right-handed alpha
Helix 76
76
F
271 278Right-handed alpha
Helix 77
77
F
281 292Right-handed alpha
Helix 78
78
F
307 320Right-handed alpha
Helix 79
79
F
326 338Right-handed alpha
Helix 80
80
F
344 353Right-handed alpha
Helix 81
81
F
372 381Right-handed alpha
Helix 82
82
F
385 389Right-handed 310
Helix 83
83
F
390 409Right-handed alpha
Helix 84
84
F
419 423Right-handed 310
Helix 85
85
G
782 795Right-handed alpha
Helix 86
86
G
800 812Right-handed alpha
Helix 87
87
G
813 815Right-handed 310
Helix 88
88
G
816 828Right-handed alpha
Helix 89
89
G
832 834Right-handed 310
Helix 90
90
G
835 847Right-handed alpha
Helix 91
91
G
848 869Right-handed alpha
Helix 92
92
G
871 875Right-handed 310
Helix 93
93
G
876 891Right-handed alpha
Helix 94
94
G
892 895Right-handed 310
Helix 95
95
G
904 915Right-handed alpha
Helix 96
96
G
917 930Right-handed alpha
Helix 97
97
G
931 935Right-handed 310
Helix 98
98
G
942 959Right-handed alpha
Helix 99
99
G
962 976Right-handed alpha
Helix 100
100
H
782 795Right-handed alpha
Helix 101
101
H
800 812Right-handed alpha
Helix 102
102
H
813 815Right-handed 310
Helix 103
103
H
816 828Right-handed alpha
Helix 104
104
H
832 834Right-handed 310
Helix 105
105
H
835 847Right-handed alpha
Helix 106
106
H
848 869Right-handed alpha
Helix 107
107
H
871 875Right-handed 310
Helix 108
108
H
876 891Right-handed alpha
Helix 109
109
H
892 895Right-handed 310
Helix 110
110
H
904 915Right-handed alpha
Helix 111
111
H
917 930Right-handed alpha
Helix 112
112
H
931 935Right-handed 310
Helix 113
113
H
942 959Right-handed alpha
Helix 114
114
H
962 976Right-handed alpha
Helix 115
115
I
782 795Right-handed alpha
Helix 116
116
I
800 812Right-handed alpha
Helix 117
117
I
813 815Right-handed 310
Helix 118
118
I
816 828Right-handed alpha
Helix 119
119
I
832 834Right-handed 310
Helix 120
120
I
835 847Right-handed alpha
Helix 121
121
I
848 869Right-handed alpha
Helix 122
122
I
871 875Right-handed 310
Helix 123
123
I
876 891Right-handed alpha
Helix 124
124
I
892 895Right-handed 310
Helix 125
125
I
904 915Right-handed alpha
Helix 126
126
I
917 930Right-handed alpha
Helix 127
127
I
931 935Right-handed 310
Helix 128
128
I
942 959Right-handed alpha
Helix 129
129
I
962 976Right-handed alpha
Helix 130
130
J
142 148Right-handed alpha
Helix 131
131
J
154 170Right-handed alpha
Helix 132
132
J
175 187Right-handed alpha
Helix 133
133
J
244 259Right-handed alpha
Helix 134
134
J
350 356Right-handed 310
Helix 135
135
J
373 380Right-handed 310
Helix 136
136
J
399 403Right-handed 310
Helix 137
137
J
440 462Right-handed alpha
Helix 138
138
K
142 147Right-handed 310
Helix 139
139
K
154 170Right-handed alpha
Helix 140
140
K
175 187Right-handed alpha
Helix 141
141
K
244 259Right-handed alpha
Helix 142
142
K
350 356Right-handed 310
Helix 143
143
K
373 380Right-handed 310
Helix 144
144
K
398 403Right-handed 310
Helix 145
145
K
440 461Right-handed alpha
Helix 146
146
K
514 519Right-handed 310
Helix 147
147
K
527 532Right-handed alpha
Helix 148
148
K
532 547Right-handed alpha
Helix 149
149
K
558 564Right-handed alpha
Helix 150
150
K
799 804Right-handed alpha
Helix 151
151
L
142 148Right-handed alpha
Helix 152
152
L
154 170Right-handed alpha
Helix 153
153
L
175 187Right-handed alpha
Helix 154
154
L
244 259Right-handed alpha
Helix 155
155
L
350 356Right-handed 310
Helix 156
156
L
373 380Right-handed 310
Helix 157
157
L
399 403Right-handed 310
Helix 158
158
L
440 462Right-handed alpha
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There are 13 sheets in PDB entry 4B8C. Click on sheet of interest to get list of strands forming it: AA, AB, CA, CB, A, DB, EA, EB, FA, JA, KA, KB, LA,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
160 163first strand
Strand 2
A
243 247parallel
Strand 3
A
224 230anti-parallel
Strand 4
A
184 190anti-parallel
Strand 5
A
301 304parallel
Strand 6
A
341 343parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
197 199first strand
Strand 2
D
338 340anti-parallel
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There are 6 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
160 163first strand
Strand 2
C
243 247parallel
Strand 3
C
224 230anti-parallel
Strand 4
C
184 190anti-parallel
Strand 5
C
301 304parallel
Strand 6
C
341 343parallel
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There are 2 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
197 199first strand
Strand 2
K
338 340anti-parallel
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There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
384 386first strand
Strand 2
D
407 409parallel
Strand 3
D
431 432parallel
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There are 3 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
552 554first strand
Strand 2
D
600 602anti-parallel
Strand 3
D
577 578anti-parallel
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There are 6 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
160 163first strand
Strand 2
E
243 247parallel
Strand 3
E
224 230anti-parallel
Strand 4
E
184 190anti-parallel
Strand 5
E
301 304parallel
Strand 6
E
341 343parallel
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There are 2 strands in EB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
197 199first strand
Strand 2
L
338 340anti-parallel
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There are 6 strands in FA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
160 163first strand
Strand 2
F
243 247parallel
Strand 3
F
224 230anti-parallel
Strand 4
F
184 190anti-parallel
Strand 5
F
301 304parallel
Strand 6
F
341 343parallel
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There are 3 strands in JA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
384 386first strand
Strand 2
J
407 409parallel
Strand 3
J
430 432parallel
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There are 3 strands in KA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
384 386first strand
Strand 2
K
407 409parallel
Strand 3
K
431 432parallel
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There are 3 strands in KB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
552 554first strand
Strand 2
K
600 602anti-parallel
Strand 3
K
577 578anti-parallel
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There are 3 strands in LA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
384 386first strand
Strand 2
L
407 409parallel
Strand 3
L
430 432parallel
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