Analysis of interatomic Contacts of Structural Units in PDB entry:
4B8J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4B8J entry

There is 1 chain in PDB entry 4B8J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 25MET 494
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 4B8J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
73 82Right-handed alpha
Helix 2
2
A
85 101Right-handed alpha
Helix 3
3
A
107 114Right-handed alpha
Helix 4
4
A
116 125Right-handed alpha
Helix 5
5
A
129 145Right-handed alpha
Helix 6
6
A
147 157Right-handed alpha
Helix 7
7
A
158 167Right-handed alpha
Helix 8
8
A
171 188Right-handed alpha
Helix 9
9
A
189 199Right-handed alpha
Helix 10
10
A
201 208Right-handed alpha
Helix 11
11
A
214 230Right-handed alpha
Helix 12
12
A
236 241Right-handed alpha
Helix 13
13
A
242 251Right-handed alpha
Helix 14
14
A
255 270Right-handed alpha
Helix 15
15
A
273 283Right-handed alpha
Helix 16
16
A
285 293Right-handed alpha
Helix 17
17
A
297 312Right-handed alpha
Helix 18
18
A
315 324Right-handed alpha
Helix 19
19
A
326 337Right-handed alpha
Helix 20
20
A
340 356Right-handed alpha
Helix 21
21
A
358 368Right-handed alpha
Helix 22
22
A
370 381Right-handed alpha
Helix 23
23
A
382 400Right-handed alpha
Helix 24
24
A
401 411Right-handed alpha
Helix 25
25
A
413 420Right-handed alpha
Helix 26
26
A
421 423Right-handed 310
Helix 27
27
A
425 451Right-handed alpha
Helix 28
28
A
455 464Right-handed alpha
Helix 29
29
A
465 473Right-handed alpha
Helix 30
30
A
474 476Right-handed 310
Helix 31
31
A
478 493Right-handed alpha
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There are no sheets in PDB entry 4B8J
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il