Analysis of interatomic Contacts of Structural Units in PDB entry:
4BB7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4BB7 entry

There are 4 chains in PDB entry 4BB7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	HIS 399	THR 634
B	PRO 398	THR 634
C	MET 400	THR 633
D	HIS 399	THR 633

There are 19 helices in PDB entry 4BB7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	452	456	Right-handed 310
Helix 2	2	A	492	497	Right-handed alpha
Helix 3	3	A	527	532	Right-handed 310
Helix 4	4	A	533	537	Right-handed 310
Helix 5	5	A	558	562	Right-handed 310
Helix 6	6	B	452	455	Right-handed 310
Helix 7	7	B	492	497	Right-handed alpha
Helix 8	8	B	527	532	Right-handed 310
Helix 9	9	B	533	537	Right-handed 310
Helix 10	10	B	558	562	Right-handed 310
Helix 11	11	C	452	455	Right-handed 310
Helix 12	12	C	492	497	Right-handed alpha
Helix 13	13	C	527	532	Right-handed 310
Helix 14	14	C	558	562	Right-handed 310
Helix 15	15	D	452	455	Right-handed 310
Helix 16	16	D	492	497	Right-handed alpha
Helix 17	17	D	527	532	Right-handed 310
Helix 18	18	D	533	537	Right-handed 310
Helix 19	19	D	558	562	Right-handed 310

There are 35 sheets in PDB entry 4BB7. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, BA, BB, BC, BD, BE, BF, BG, BH, BI, BJ, CA, CB, CC, CD, CE, CF, CG, CH, A, DB, C, DD, DE, DF, G,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	403	405	first strand
Strand 2	A	408	410	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	470	479	first strand
Strand 2	A	443	451	anti-parallel
Strand 3	A	428	437	anti-parallel
Strand 4	A	415	418	anti-parallel
Strand 5	A	483	486	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	458	459	first strand
Strand 2	A	589	590	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	463	465	first strand
Strand 2	A	549	555	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	613	614	first strand
Strand 2	A	549	555	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	624	626	first strand
Strand 2	A	631	633	anti-parallel
Strand 3	A	549	555	anti-parallel
Strand 4	A	613	614	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	624	626	first strand
Strand 2	A	631	633	anti-parallel
Strand 3	A	549	555	anti-parallel
Strand 4	A	463	465	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	488	491	first strand
Strand 2	A	508	511	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	498	500	first strand
Strand 2	A	543	545	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	513	516	first strand
Strand 2	A	521	524	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	403	404	first strand
Strand 2	B	409	410	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	470	479	first strand
Strand 2	B	443	451	anti-parallel
Strand 3	B	428	437	anti-parallel
Strand 4	B	415	418	anti-parallel
Strand 5	B	483	486	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	457	459	first strand
Strand 2	B	588	590	parallel

Back to list of sheets
Back to top of page

There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	464	465	first strand
Strand 2	B	549	554	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in BE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	613	614	first strand
Strand 2	B	549	554	parallel

Back to list of sheets
Back to top of page

There are 4 strands in BF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	624	626	first strand
Strand 2	B	631	633	anti-parallel
Strand 3	B	549	554	anti-parallel
Strand 4	B	613	614	parallel

Back to list of sheets
Back to top of page

There are 4 strands in BG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	624	626	first strand
Strand 2	B	631	633	anti-parallel
Strand 3	B	549	554	anti-parallel
Strand 4	B	464	465	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in BH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	488	491	first strand
Strand 2	B	508	511	parallel

Back to list of sheets
Back to top of page

There are 2 strands in BI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	498	500	first strand
Strand 2	B	543	545	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in BJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	513	516	first strand
Strand 2	B	521	524	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	403	405	first strand
Strand 2	C	408	410	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	470	479	first strand
Strand 2	C	443	451	anti-parallel
Strand 3	C	428	437	anti-parallel
Strand 4	C	415	418	anti-parallel
Strand 5	C	483	486	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in CC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	457	459	first strand
Strand 2	C	588	590	parallel

Back to list of sheets
Back to top of page

There are 2 strands in CD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	463	464	first strand
Strand 2	C	554	555	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in CE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	488	491	first strand
Strand 2	C	508	511	parallel

Back to list of sheets
Back to top of page

There are 2 strands in CF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	498	500	first strand
Strand 2	C	543	545	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in CG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	513	516	first strand
Strand 2	C	521	524	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in CH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	613	614	first strand
Strand 2	C	550	552	parallel
Strand 3	C	631	633	anti-parallel
Strand 4	C	624	626	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	403	405	first strand
Strand 2	D	408	410	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in DB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	470	479	first strand
Strand 2	D	443	451	anti-parallel
Strand 3	D	428	437	anti-parallel
Strand 4	D	415	418	anti-parallel
Strand 5	D	483	486	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	457	459	first strand
Strand 2	D	588	590	parallel

Back to list of sheets
Back to top of page

There are 2 strands in DD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	488	491	first strand
Strand 2	D	508	511	parallel

Back to list of sheets
Back to top of page

There are 2 strands in DE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	498	500	first strand
Strand 2	D	543	545	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in DF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	513	516	first strand
Strand 2	D	521	524	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	613	614	first strand
Strand 2	D	550	552	parallel
Strand 3	D	631	633	anti-parallel
Strand 4	D	624	626	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4BB7

Analysis of interatomic Contacts of Structural Units in PDB entry:
4BB7