Analysis of interatomic Contacts of Structural Units in PDB entry:
4BCL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4BCL entry

There is 1 chain in PDB entry 4BCL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 8GLN 366
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 4BCL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
127 130Right-handed alpha
Helix 2
2
A
156 168Right-handed alpha
Helix 3
3
A
176 184Right-handed alpha
Helix 4
4
A
187 195Right-handed 310
Helix 5
5
A
234 237Right-handed alpha
Helix 6
6
A
245 247Right-handed 310
Helix 7
7
A
292 300Right-handed alpha
Helix 8
8
A
343 354Right-handed alpha
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There are 4 sheets in PDB entry 4BCL. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 15 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 200first strand
Strand 2
A
218 229anti-parallel
Strand 3
A
141 152anti-parallel
Strand 4
A
108 122anti-parallel
Strand 5
A
94 105anti-parallel
Strand 6
A
77 89anti-parallel
Strand 7
A
63 74anti-parallel
Strand 8
A
46 58anti-parallel
Strand 9
A
252 260anti-parallel
Strand 10
A
265 273anti-parallel
Strand 11
A
27 35anti-parallel
Strand 12
A
10 19anti-parallel
Strand 13
A
308 316parallel
Strand 14
A
337 341anti-parallel
Strand 15
A
332 334anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
204 211first strand
Strand 2
A
218 224anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
277 281first strand
Strand 2
A
284 287anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
322 327first strand
Strand 2
A
361 365anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il