Analysis of interatomic Contacts of Structural Units in PDB entry:
4BE7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4BE7 entry

There are 2 chains in PDB entry 4BE7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	ASN 13	GLN 886
D	ASN 13	SER 885

There are 79 helices in PDB entry 4BE7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	B	32	47	Right-handed alpha
Helix 2	2	B	56	73	Right-handed alpha
Helix 3	3	B	77	88	Right-handed alpha
Helix 4	4	B	95	105	Right-handed alpha
Helix 5	5	B	128	132	Right-handed 310
Helix 6	6	B	172	180	Right-handed alpha
Helix 7	7	B	192	198	Right-handed 310
Helix 8	8	B	222	226	Right-handed 310
Helix 9	9	B	239	247	Right-handed alpha
Helix 10	10	B	249	259	Right-handed alpha
Helix 11	11	B	273	293	Right-handed alpha
Helix 12	12	B	312	325	Right-handed alpha
Helix 13	13	B	338	342	Right-handed 310
Helix 14	14	B	343	354	Right-handed alpha
Helix 15	15	B	364	371	Right-handed alpha
Helix 16	16	B	383	393	Right-handed alpha
Helix 17	17	B	396	400	Right-handed 310
Helix 18	18	B	411	426	Right-handed alpha
Helix 19	19	B	440	444	Right-handed 310
Helix 20	20	B	449	455	Right-handed alpha
Helix 21	21	B	462	469	Right-handed alpha
Helix 22	22	B	483	491	Right-handed alpha
Helix 23	23	B	494	501	Right-handed alpha
Helix 24	24	B	509	528	Right-handed alpha
Helix 25	25	B	546	568	Right-handed alpha
Helix 26	26	B	600	604	Right-handed 310
Helix 27	27	B	605	624	Right-handed alpha
Helix 28	28	B	630	647	Right-handed alpha
Helix 29	29	B	678	687	Right-handed alpha
Helix 30	30	B	688	690	Right-handed 310
Helix 31	31	B	708	719	Right-handed alpha
Helix 32	32	B	723	729	Right-handed alpha
Helix 33	33	B	732	739	Right-handed alpha
Helix 34	34	B	751	763	Right-handed alpha
Helix 35	35	B	771	793	Right-handed alpha
Helix 36	36	B	795	804	Right-handed alpha
Helix 37	37	B	812	822	Right-handed alpha
Helix 38	38	B	825	833	Right-handed alpha
Helix 39	39	B	839	859	Right-handed alpha
Helix 40	40	B	879	886	Right-handed alpha
Helix 41	41	D	32	47	Right-handed alpha
Helix 42	42	D	56	73	Right-handed alpha
Helix 43	43	D	77	88	Right-handed alpha
Helix 44	44	D	95	105	Right-handed alpha
Helix 45	45	D	128	132	Right-handed 310
Helix 46	46	D	172	180	Right-handed alpha
Helix 47	47	D	192	198	Right-handed 310
Helix 48	48	D	222	226	Right-handed 310
Helix 49	49	D	239	247	Right-handed alpha
Helix 50	50	D	249	259	Right-handed alpha
Helix 51	51	D	273	293	Right-handed alpha
Helix 52	52	D	312	325	Right-handed alpha
Helix 53	53	D	339	342	Right-handed 310
Helix 54	54	D	343	354	Right-handed alpha
Helix 55	55	D	364	371	Right-handed alpha
Helix 56	56	D	383	393	Right-handed alpha
Helix 57	57	D	396	400	Right-handed 310
Helix 58	58	D	411	426	Right-handed alpha
Helix 59	59	D	449	455	Right-handed alpha
Helix 60	60	D	462	469	Right-handed alpha
Helix 61	61	D	486	491	Right-handed alpha
Helix 62	62	D	494	501	Right-handed alpha
Helix 63	63	D	509	528	Right-handed alpha
Helix 64	64	D	546	568	Right-handed alpha
Helix 65	65	D	600	604	Right-handed 310
Helix 66	66	D	605	624	Right-handed alpha
Helix 67	67	D	630	647	Right-handed alpha
Helix 68	68	D	678	687	Right-handed alpha
Helix 69	69	D	688	690	Right-handed 310
Helix 70	70	D	708	719	Right-handed alpha
Helix 71	71	D	723	729	Right-handed alpha
Helix 72	72	D	732	739	Right-handed alpha
Helix 73	73	D	751	763	Right-handed alpha
Helix 74	74	D	771	793	Right-handed alpha
Helix 75	75	D	795	804	Right-handed alpha
Helix 76	76	D	812	823	Right-handed alpha
Helix 77	77	D	828	833	Right-handed alpha
Helix 78	78	D	839	859	Right-handed alpha
Helix 79	79	D	879	884	Right-handed alpha

There are 13 sheets in PDB entry 4BE7. Click on sheet of interest to get list of strands forming it: BA, BB, BC, BD, BE, BF, BG, A, DB, C, DD, DE, DF,

There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	50	51	first strand
Strand 2	B	134	138	parallel
Strand 3	B	150	156	anti-parallel
Strand 4	B	159	166	anti-parallel
Strand 5	B	200	204	parallel
Strand 6	B	209	213	anti-parallel

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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	108	112	first strand
Strand 2	B	118	122	anti-parallel

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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	229	230	first strand
Strand 2	B	236	237	anti-parallel

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There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	261	263	first strand
Strand 2	B	269	271	anti-parallel

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There are 6 strands in BE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	378	382	first strand
Strand 2	B	332	337	parallel
Strand 3	B	402	408	parallel
Strand 4	B	428	435	parallel
Strand 5	B	303	307	parallel
Strand 6	B	457	461	parallel

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There are 6 strands in BF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	475	479	first strand
Strand 2	B	700	704	parallel
Strand 3	B	668	674	parallel
Strand 4	B	539	544	parallel
Strand 5	B	652	655	parallel
Strand 6	B	576	579	parallel

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There are 2 strands in BG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	740	741	first strand
Strand 2	B	748	749	anti-parallel

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There are 6 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	50	51	first strand
Strand 2	D	134	138	parallel
Strand 3	D	150	156	anti-parallel
Strand 4	D	159	166	anti-parallel
Strand 5	D	200	204	parallel
Strand 6	D	209	213	anti-parallel

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There are 2 strands in DB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	108	112	first strand
Strand 2	D	118	122	anti-parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	261	263	first strand
Strand 2	D	269	271	anti-parallel

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There are 6 strands in DD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	378	382	first strand
Strand 2	D	332	337	parallel
Strand 3	D	402	408	parallel
Strand 4	D	428	435	parallel
Strand 5	D	303	307	parallel
Strand 6	D	457	461	parallel

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There are 6 strands in DE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	475	479	first strand
Strand 2	D	700	704	parallel
Strand 3	D	668	674	parallel
Strand 4	D	539	544	parallel
Strand 5	D	652	655	parallel
Strand 6	D	576	579	parallel

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There are 2 strands in DF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	740	741	first strand
Strand 2	D	748	749	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4BE7

Analysis of interatomic Contacts of Structural Units in PDB entry:
4BE7