Analysis of interatomic Contacts of Structural Units in PDB entry:
4BG8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4BG8 entry

There are 2 chains in PDB entry 4BG8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 37GLY 350
B
 LEU 37GLY 350
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 4BG8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
79 90Right-handed alpha
Helix 2
2
A
90 103Right-handed alpha
Helix 3
3
A
113 129Right-handed alpha
Helix 4
4
A
144 147Right-handed 310
Helix 5
5
A
148 158Right-handed alpha
Helix 6
6
A
191 203Right-handed alpha
Helix 7
7
A
212 216Right-handed 310
Helix 8
8
A
219 227Right-handed alpha
Helix 9
9
A
247 262Right-handed alpha
Helix 10
10
A
265 286Right-handed alpha
Helix 11
11
A
287 289Right-handed 310
Helix 12
12
A
297 301Right-handed 310
Helix 13
13
A
302 313Right-handed alpha
Helix 14
14
A
324 339Right-handed alpha
Helix 15
15
B
79 90Right-handed alpha
Helix 16
16
B
90 103Right-handed alpha
Helix 17
17
B
113 129Right-handed alpha
Helix 18
18
B
144 147Right-handed 310
Helix 19
19
B
148 158Right-handed alpha
Helix 20
20
B
191 203Right-handed alpha
Helix 21
21
B
212 216Right-handed 310
Helix 22
22
B
219 227Right-handed alpha
Helix 23
23
B
247 262Right-handed alpha
Helix 24
24
B
265 286Right-handed alpha
Helix 25
25
B
287 289Right-handed 310
Helix 26
26
B
297 301Right-handed 310
Helix 27
27
B
302 313Right-handed alpha
Helix 28
28
B
324 339Right-handed alpha
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There are 12 sheets in PDB entry 4BG8. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, BA, BB, BC, BD, BE, BF,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 67first strand
Strand 2
A
50 56anti-parallel
Strand 3
A
39 45anti-parallel
Strand 4
A
106 111parallel
Strand 5
A
132 135parallel
Strand 6
A
345 348anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
179 180first strand
Strand 2
A
169 176parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
186 189first strand
Strand 2
A
169 176anti-parallel
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There are 5 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
316 319first strand
Strand 2
A
292 296parallel
Strand 3
A
161 166parallel
Strand 4
A
169 176anti-parallel
Strand 5
A
179 180parallel
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There are 5 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
316 319first strand
Strand 2
A
292 296parallel
Strand 3
A
161 166parallel
Strand 4
A
169 176anti-parallel
Strand 5
A
186 189anti-parallel
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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
230 231first strand
Strand 2
A
234 235anti-parallel
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There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
61 67first strand
Strand 2
B
50 56anti-parallel
Strand 3
B
39 45anti-parallel
Strand 4
B
106 111parallel
Strand 5
B
132 135parallel
Strand 6
B
345 348anti-parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
179 180first strand
Strand 2
B
169 176parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
186 189first strand
Strand 2
B
169 176anti-parallel
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There are 5 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
316 319first strand
Strand 2
B
292 296parallel
Strand 3
B
161 166parallel
Strand 4
B
169 176anti-parallel
Strand 5
B
179 180parallel
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There are 5 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
316 319first strand
Strand 2
B
292 296parallel
Strand 3
B
161 166parallel
Strand 4
B
169 176anti-parallel
Strand 5
B
186 189anti-parallel
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There are 2 strands in BF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
230 231first strand
Strand 2
B
234 235anti-parallel
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