Analysis of interatomic Contacts of Structural Units in PDB entry:
4BG9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4BG9 entry

There is 1 chain in PDB entry 4BG9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 37GLY 351
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 4BG9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
79 90Right-handed alpha
Helix 2
2
A
90 103Right-handed alpha
Helix 3
3
A
113 129Right-handed alpha
Helix 4
4
A
144 147Right-handed 310
Helix 5
5
A
148 158Right-handed alpha
Helix 6
6
A
191 203Right-handed alpha
Helix 7
7
A
212 216Right-handed 310
Helix 8
8
A
219 228Right-handed alpha
Helix 9
9
A
247 262Right-handed alpha
Helix 10
10
A
265 286Right-handed alpha
Helix 11
11
A
287 289Right-handed 310
Helix 12
12
A
297 301Right-handed 310
Helix 13
13
A
302 313Right-handed alpha
Helix 14
14
A
324 339Right-handed alpha
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There are 6 sheets in PDB entry 4BG9. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 68first strand
Strand 2
A
49 56anti-parallel
Strand 3
A
39 45anti-parallel
Strand 4
A
106 111parallel
Strand 5
A
132 135parallel
Strand 6
A
345 348anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
179 180first strand
Strand 2
A
169 176parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
186 189first strand
Strand 2
A
169 176anti-parallel
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There are 5 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
316 319first strand
Strand 2
A
292 296parallel
Strand 3
A
161 166parallel
Strand 4
A
169 176anti-parallel
Strand 5
A
179 180parallel
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There are 5 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
316 319first strand
Strand 2
A
292 296parallel
Strand 3
A
161 166parallel
Strand 4
A
169 176anti-parallel
Strand 5
A
186 189anti-parallel
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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
230 231first strand
Strand 2
A
234 235anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il