Analysis of interatomic Contacts of Structural Units in PDB entry:
4BGV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4BGV entry

There are 4 chains in PDB entry 4BGV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2GLN 324
B
 ALA 2GLN 324
C
 ALA 2GLN 324
D
 ALA 2TYR 319
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 67 helices in PDB entry 4BGV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 25Right-handed alpha
Helix 2
2
A
38 49Right-handed alpha
Helix 3
3
A
50 55Right-handed alpha
Helix 4
4
A
67 75Right-handed 310
Helix 5
5
A
93 116Right-handed alpha
Helix 6
6
A
127 140Right-handed alpha
Helix 7
7
A
142 144Right-handed 310
Helix 8
8
A
150 167Right-handed alpha
Helix 9
9
A
169 171Right-handed 310
Helix 10
10
A
181 183Right-handed 310
Helix 11
11
A
200 202Right-handed 310
Helix 12
12
A
204 217Right-handed alpha
Helix 13
13
A
217 227Right-handed alpha
Helix 14
14
A
232 248Right-handed alpha
Helix 15
15
A
262 269Right-handed alpha
Helix 16
16
A
295 323Right-handed alpha
Helix 17
17
B
12 25Right-handed alpha
Helix 18
18
B
38 49Right-handed alpha
Helix 19
19
B
50 55Right-handed alpha
Helix 20
20
B
67 75Right-handed 310
Helix 21
21
B
93 116Right-handed alpha
Helix 22
22
B
127 140Right-handed alpha
Helix 23
23
B
142 144Right-handed 310
Helix 24
24
B
150 167Right-handed alpha
Helix 25
25
B
169 171Right-handed 310
Helix 26
26
B
181 183Right-handed 310
Helix 27
27
B
189 191Right-handed 310
Helix 28
28
B
200 202Right-handed 310
Helix 29
29
B
204 217Right-handed alpha
Helix 30
30
B
217 227Right-handed alpha
Helix 31
31
B
232 248Right-handed alpha
Helix 32
32
B
263 269Right-handed alpha
Helix 33
33
B
295 323Right-handed alpha
Helix 34
34
C
12 25Right-handed alpha
Helix 35
35
C
38 49Right-handed alpha
Helix 36
36
C
50 55Right-handed alpha
Helix 37
37
C
67 75Right-handed 310
Helix 38
38
C
93 116Right-handed alpha
Helix 39
39
C
127 140Right-handed alpha
Helix 40
40
C
142 144Right-handed 310
Helix 41
41
C
150 167Right-handed alpha
Helix 42
42
C
169 171Right-handed 310
Helix 43
43
C
181 183Right-handed 310
Helix 44
44
C
189 191Right-handed 310
Helix 45
45
C
200 202Right-handed 310
Helix 46
46
C
204 217Right-handed alpha
Helix 47
47
C
217 227Right-handed alpha
Helix 48
48
C
232 248Right-handed alpha
Helix 49
49
C
262 269Right-handed alpha
Helix 50
50
C
295 322Right-handed alpha
Helix 51
51
D
12 25Right-handed alpha
Helix 52
52
D
38 49Right-handed alpha
Helix 53
53
D
50 55Right-handed alpha
Helix 54
54
D
67 75Right-handed 310
Helix 55
55
D
93 116Right-handed alpha
Helix 56
56
D
127 140Right-handed alpha
Helix 57
57
D
142 144Right-handed 310
Helix 58
58
D
150 167Right-handed alpha
Helix 59
59
D
169 171Right-handed 310
Helix 60
60
D
181 183Right-handed 310
Helix 61
61
D
189 191Right-handed 310
Helix 62
62
D
200 202Right-handed 310
Helix 63
63
D
204 217Right-handed alpha
Helix 64
64
D
217 227Right-handed alpha
Helix 65
65
D
232 248Right-handed alpha
Helix 66
66
D
263 269Right-handed alpha
Helix 67
67
D
295 323Right-handed alpha
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There are 15 sheets in PDB entry 4BGV. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC, BD, CA, CB, CC, CD, A, DB, C, DD,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 64first strand
Strand 2
A
29 34parallel
Strand 3
A
5 9parallel
Strand 4
A
79 82parallel
Strand 5
A
120 123parallel
Strand 6
A
146 148parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
173 179first strand
Strand 2
A
185 194anti-parallel
Strand 3
A
197 198anti-parallel
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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
252 260first strand
Strand 2
A
273 282anti-parallel
Strand 3
A
285 289anti-parallel
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There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 64first strand
Strand 2
B
29 34parallel
Strand 3
B
5 9parallel
Strand 4
B
79 82parallel
Strand 5
B
120 123parallel
Strand 6
B
146 148parallel
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There are 3 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
173 174first strand
Strand 2
B
193 194anti-parallel
Strand 3
B
197 198anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
177 179first strand
Strand 2
B
185 187anti-parallel
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There are 3 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
252 260first strand
Strand 2
B
273 282anti-parallel
Strand 3
B
285 289anti-parallel
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There are 6 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
60 64first strand
Strand 2
C
29 34parallel
Strand 3
C
5 9parallel
Strand 4
C
79 82parallel
Strand 5
C
120 123parallel
Strand 6
C
146 148parallel
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There are 3 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
173 174first strand
Strand 2
C
193 194anti-parallel
Strand 3
C
197 198anti-parallel
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There are 2 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
177 179first strand
Strand 2
C
185 187anti-parallel
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There are 3 strands in CD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
252 260first strand
Strand 2
C
273 282anti-parallel
Strand 3
C
285 289anti-parallel
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There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
60 64first strand
Strand 2
D
29 34parallel
Strand 3
D
5 9parallel
Strand 4
D
79 82parallel
Strand 5
D
120 123parallel
Strand 6
D
146 148parallel
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There are 3 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
173 174first strand
Strand 2
D
193 194anti-parallel
Strand 3
D
197 198anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
177 179first strand
Strand 2
D
185 187anti-parallel
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There are 3 strands in DD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
252 260first strand
Strand 2
D
273 282anti-parallel
Strand 3
D
285 289anti-parallel
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