Analysis of interatomic Contacts of Structural Units in PDB entry:
4BHY

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4BHY entry

There are 8 chains in PDB entry 4BHY (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU -6	LEU 121
A	LEU 123	VAL 357
B	THR -7	LEU 121
B	LEU 123	VAL 357
C	PHE -2	LEU 121
C	LEU 123	VAL 357
D	ASP -13	LEU 121
D	LEU 123	VAL 357

There are 42 helices in PDB entry 4BHY. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	10	24	Right-handed alpha
Helix 2	2	A	34	40	Right-handed alpha
Helix 3	3	A	41	49	Right-handed alpha
Helix 4	4	A	59	68	Right-handed alpha
Helix 5	5	A	83	86	Right-handed 310
Helix 6	6	A	87	94	Right-handed alpha
Helix 7	7	A	101	111	Right-handed alpha
Helix 8	8	A	140	146	Right-handed alpha
Helix 9	9	A	176	182	Right-handed alpha
Helix 10	10	A	329	338	Right-handed alpha
Helix 11	11	A	340	345	Right-handed alpha
Helix 12	12	B	9	24	Right-handed alpha
Helix 13	13	B	41	49	Right-handed alpha
Helix 14	14	B	59	69	Right-handed alpha
Helix 15	15	B	83	85	Right-handed 310
Helix 16	16	B	86	93	Right-handed alpha
Helix 17	17	B	101	111	Right-handed alpha
Helix 18	18	B	140	146	Right-handed alpha
Helix 19	19	B	329	338	Right-handed alpha
Helix 20	20	B	340	347	Right-handed alpha
Helix 21	21	C	9	24	Right-handed alpha
Helix 22	22	C	33	40	Right-handed alpha
Helix 23	23	C	41	49	Right-handed alpha
Helix 24	24	C	59	69	Right-handed alpha
Helix 25	25	C	83	85	Right-handed 310
Helix 26	26	C	86	93	Right-handed alpha
Helix 27	27	C	101	111	Right-handed alpha
Helix 28	28	C	140	146	Right-handed alpha
Helix 29	29	C	177	182	Right-handed alpha
Helix 30	30	C	329	338	Right-handed alpha
Helix 31	31	C	340	347	Right-handed alpha
Helix 32	32	D	9	24	Right-handed alpha
Helix 33	33	D	35	40	Right-handed alpha
Helix 34	34	D	41	49	Right-handed alpha
Helix 35	35	D	59	68	Right-handed alpha
Helix 36	36	D	83	85	Right-handed 310
Helix 37	37	D	86	93	Right-handed alpha
Helix 38	38	D	101	111	Right-handed alpha
Helix 39	39	D	140	147	Right-handed alpha
Helix 40	40	D	177	182	Right-handed alpha
Helix 41	41	D	329	338	Right-handed alpha
Helix 42	42	D	340	347	Right-handed alpha

There are 15 sheets in PDB entry 4BHY. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC, BD, BE, CA, CB, CC, CD, A, DB, C,

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	234	237	first strand
Strand 2	A	5	9	anti-parallel
Strand 3	A	353	357	parallel

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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	30	32	first strand
Strand 2	A	54	57	parallel
Strand 3	A	75	77	parallel
Strand 4	A	95	98	parallel
Strand 5	A	119	120	parallel

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There are 5 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	240	245	first strand
Strand 2	A	265	269	anti-parallel
Strand 3	A	305	308	anti-parallel
Strand 4	A	292	300	anti-parallel
Strand 5	A	285	289	anti-parallel

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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	5	7	first strand
Strand 2	B	235	237	anti-parallel

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There are 5 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	95	96	first strand
Strand 2	B	75	77	parallel
Strand 3	B	54	57	parallel
Strand 4	B	28	32	parallel
Strand 5	B	207	208	parallel

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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	98	99	first strand
Strand 2	B	120	121	parallel

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There are 3 strands in BD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	240	244	first strand
Strand 2	B	266	269	anti-parallel
Strand 3	B	305	308	anti-parallel

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There are 2 strands in BE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	288	289	first strand
Strand 2	B	292	293	anti-parallel

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There are 3 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	235	237	first strand
Strand 2	C	5	7	anti-parallel
Strand 3	C	353	355	parallel

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There are 6 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	118	121	first strand
Strand 2	C	95	99	parallel
Strand 3	C	75	77	parallel
Strand 4	C	54	57	parallel
Strand 5	C	28	32	parallel
Strand 6	C	207	208	parallel

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There are 2 strands in CC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	267	269	first strand
Strand 2	C	305	307	anti-parallel

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There are 2 strands in CD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	286	289	first strand
Strand 2	C	292	295	anti-parallel

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There are 3 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	234	237	first strand
Strand 2	D	5	8	anti-parallel
Strand 3	D	353	355	parallel

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There are 6 strands in DB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	118	121	first strand
Strand 2	D	95	99	parallel
Strand 3	D	75	77	parallel
Strand 4	D	54	57	parallel
Strand 5	D	28	32	parallel
Strand 6	D	207	208	parallel

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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	266	269	first strand
Strand 2	D	305	308	anti-parallel
Strand 3	D	292	300	anti-parallel
Strand 4	D	286	289	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4BHY

Analysis of interatomic Contacts of Structural Units in PDB entry:
4BHY