Analysis of interatomic Contacts of Structural Units in PDB entry:
4BIE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4BIE entry

There are 2 chains in PDB entry 4BIE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 670VAL 940
B
 LEU 670SER 941
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 4BIE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
723 730Right-handed alpha
Helix 2
2
A
762 769Right-handed alpha
Helix 3
3
A
776 797Right-handed alpha
Helix 4
4
A
842 846Right-handed 310
Helix 5
5
A
847 854Right-handed alpha
Helix 6
6
A
855 858Right-handed 310
Helix 7
7
A
859 877Right-handed alpha
Helix 8
8
A
881 885Right-handed 310
Helix 9
9
A
886 898Right-handed alpha
Helix 10
10
A
908 919Right-handed alpha
Helix 11
11
A
928 934Right-handed alpha
Helix 12
12
A
935 939Right-handed 310
Helix 13
13
B
722 732Right-handed alpha
Helix 14
14
B
762 769Right-handed alpha
Helix 15
15
B
776 797Right-handed alpha
Helix 16
16
B
842 846Right-handed 310
Helix 17
17
B
847 853Right-handed alpha
Helix 18
18
B
854 858Right-handed 310
Helix 19
19
B
859 877Right-handed alpha
Helix 20
20
B
886 898Right-handed alpha
Helix 21
21
B
908 919Right-handed alpha
Helix 22
22
B
928 935Right-handed alpha
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There are 12 sheets in PDB entry 4BIE. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, BA, BB, BC, BD, BE, BF,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
673 675first strand
Strand 2
A
693 699anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
685 688first strand
Strand 2
A
693 699anti-parallel
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There are 5 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
740 746first strand
Strand 2
A
749 755anti-parallel
Strand 3
A
705 712anti-parallel
Strand 4
A
693 699anti-parallel
Strand 5
A
685 688anti-parallel
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There are 5 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
740 746first strand
Strand 2
A
749 755anti-parallel
Strand 3
A
705 712anti-parallel
Strand 4
A
693 699anti-parallel
Strand 5
A
673 675anti-parallel
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There are 3 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
759 761first strand
Strand 2
A
809 812anti-parallel
Strand 3
A
818 820anti-parallel
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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
799 800first strand
Strand 2
A
827 828anti-parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
673 675first strand
Strand 2
B
693 699anti-parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
685 688first strand
Strand 2
B
693 699anti-parallel
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There are 5 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
740 746first strand
Strand 2
B
749 755anti-parallel
Strand 3
B
705 712anti-parallel
Strand 4
B
693 699anti-parallel
Strand 5
B
685 688anti-parallel
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There are 5 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
740 746first strand
Strand 2
B
749 755anti-parallel
Strand 3
B
705 712anti-parallel
Strand 4
B
693 699anti-parallel
Strand 5
B
673 675anti-parallel
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There are 3 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
759 761first strand
Strand 2
B
809 812anti-parallel
Strand 3
B
818 820anti-parallel
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There are 2 strands in BF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
799 800first strand
Strand 2
B
827 828anti-parallel
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