Analysis of interatomic Contacts of Structural Units in PDB entry:
4BIN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4BIN entry

There is 1 chain in PDB entry 4BIN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 30ALA 408
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 4BIN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
81 86Right-handed alpha
Helix 2
2
A
87 91Right-handed 310
Helix 3
3
A
154 160Right-handed alpha
Helix 4
4
A
210 227Right-handed alpha
Helix 5
5
A
245 256Right-handed alpha
Helix 6
6
A
289 301Right-handed alpha
Helix 7
7
A
301 307Right-handed alpha
Helix 8
8
A
323 344Right-handed alpha
Helix 9
9
A
359 363Right-handed 310
Helix 10
10
A
379 387Right-handed alpha
Helix 11
11
A
388 407Right-handed alpha
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There are 3 sheets in PDB entry 4BIN. Click on sheet of interest to get list of strands forming it: AA, AB, AC,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 42first strand
Strand 2
A
48 54anti-parallel
Strand 3
A
136 144anti-parallel
Strand 4
A
121 128anti-parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 65first strand
Strand 2
A
70 76anti-parallel
Strand 3
A
110 117anti-parallel
Strand 4
A
98 107anti-parallel
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There are 6 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
232 236first strand
Strand 2
A
188 194parallel
Strand 3
A
260 265parallel
Strand 4
A
369 373parallel
Strand 5
A
278 282anti-parallel
Strand 6
A
355 357parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il