Analysis of interatomic Contacts of Structural Units in PDB entry:
4BIZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4BIZ entry

There are 6 chains in PDB entry 4BIZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 221LYS 455
B
 LEU 219LYS 455
C
 GLU 217LYS 455
D
 GLU 217ARG 456
E
 ALA 223LYS 455
F
 ALA 223LEU 350
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 4BIZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
221 246Right-handed alpha
Helix 2
2
A
250 269Right-handed alpha
Helix 3
3
A
271 302Right-handed alpha
Helix 4
4
A
310 328Right-handed alpha
Helix 5
5
A
346 365Right-handed alpha
Helix 6
6
A
406 413Right-handed alpha
Helix 7
7
A
419 431Right-handed alpha
Helix 8
8
B
224 268Right-handed alpha
Helix 9
9
B
271 304Right-handed alpha
Helix 10
10
B
310 328Right-handed alpha
Helix 11
11
B
346 364Right-handed alpha
Helix 12
12
B
419 431Right-handed alpha
Helix 13
13
C
218 268Right-handed alpha
Helix 14
14
C
271 302Right-handed alpha
Helix 15
15
C
310 328Right-handed alpha
Helix 16
16
C
346 365Right-handed alpha
Helix 17
17
C
406 413Right-handed alpha
Helix 18
18
C
419 431Right-handed alpha
Helix 19
19
D
224 268Right-handed alpha
Helix 20
20
D
271 303Right-handed alpha
Helix 21
21
D
310 328Right-handed alpha
Helix 22
22
D
346 364Right-handed alpha
Helix 23
23
D
420 431Right-handed alpha
Helix 24
24
E
223 250Right-handed alpha
Helix 25
25
E
250 268Right-handed alpha
Helix 26
26
E
271 301Right-handed alpha
Helix 27
27
E
310 328Right-handed alpha
Helix 28
28
E
346 365Right-handed alpha
Helix 29
29
E
406 411Right-handed alpha
Helix 30
30
E
419 431Right-handed alpha
Helix 31
31
F
224 268Right-handed alpha
Helix 32
32
F
271 304Right-handed alpha
Helix 33
33
F
310 328Right-handed alpha
Helix 34
34
F
346 365Right-handed alpha
Helix 35
35
F
419 431Right-handed alpha
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There are 12 sheets in PDB entry 4BIZ. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB, CA, CB, A, DB, EA, EB, FA, FB,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
306 309first strand
Strand 2
A
342 345anti-parallel
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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
331 336first strand
Strand 2
A
368 375parallel
Strand 3
A
379 386anti-parallel
Strand 4
A
445 452anti-parallel
Strand 5
A
434 439anti-parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
306 309first strand
Strand 2
B
342 345anti-parallel
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There are 5 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
331 336first strand
Strand 2
B
368 375parallel
Strand 3
B
379 386anti-parallel
Strand 4
B
445 452anti-parallel
Strand 5
B
434 439anti-parallel
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There are 2 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
306 309first strand
Strand 2
C
342 345anti-parallel
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There are 5 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
331 336first strand
Strand 2
C
368 375parallel
Strand 3
C
379 386anti-parallel
Strand 4
C
445 452anti-parallel
Strand 5
C
434 439anti-parallel
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There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
306 309first strand
Strand 2
D
342 345anti-parallel
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There are 5 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
331 336first strand
Strand 2
D
368 375parallel
Strand 3
D
379 386anti-parallel
Strand 4
D
444 452anti-parallel
Strand 5
D
434 438anti-parallel
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There are 2 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
306 309first strand
Strand 2
E
342 345anti-parallel
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There are 5 strands in EB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
331 336first strand
Strand 2
E
368 375parallel
Strand 3
E
379 386anti-parallel
Strand 4
E
445 452anti-parallel
Strand 5
E
434 439anti-parallel
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There are 2 strands in FA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
306 309first strand
Strand 2
F
342 345anti-parallel
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There are 5 strands in FB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
331 336first strand
Strand 2
F
368 375parallel
Strand 3
F
379 386anti-parallel
Strand 4
F
445 452anti-parallel
Strand 5
F
434 439anti-parallel
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