Analysis of interatomic Contacts of Structural Units in PDB entry:
4BJ5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4BJ5 entry

There are 6 chains in PDB entry 4BJ5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 61LEU 388
B
 LYS 63THR 389
C
 SER 675ASP 825
D
 PHE 36LYS 48
E
 SER 675ASP 825
F
 PHE 36LYS 48
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 47 helices in PDB entry 4BJ5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
63 66Right-handed 310
Helix 2
2
A
67 88Right-handed alpha
Helix 3
3
A
94 104Right-handed alpha
Helix 4
4
A
118 136Right-handed alpha
Helix 5
5
A
145 150Right-handed alpha
Helix 6
6
A
188 198Right-handed alpha
Helix 7
7
A
225 242Right-handed alpha
Helix 8
8
A
257 270Right-handed alpha
Helix 9
9
A
283 295Right-handed alpha
Helix 10
10
A
303 319Right-handed alpha
Helix 11
11
A
322 332Right-handed alpha
Helix 12
12
A
336 352Right-handed alpha
Helix 13
13
A
354 365Right-handed alpha
Helix 14
14
A
372 376Right-handed 310
Helix 15
15
B
66 88Right-handed alpha
Helix 16
16
B
94 104Right-handed alpha
Helix 17
17
B
118 136Right-handed alpha
Helix 18
18
B
145 150Right-handed alpha
Helix 19
19
B
188 198Right-handed alpha
Helix 20
20
B
225 242Right-handed alpha
Helix 21
21
B
258 270Right-handed alpha
Helix 22
22
B
283 295Right-handed alpha
Helix 23
23
B
303 319Right-handed alpha
Helix 24
24
B
322 332Right-handed alpha
Helix 25
25
B
336 352Right-handed alpha
Helix 26
26
B
354 365Right-handed alpha
Helix 27
27
B
372 376Right-handed 310
Helix 28
28
C
680 685Right-handed alpha
Helix 29
29
C
687 691Right-handed 310
Helix 30
30
C
706 710Right-handed 310
Helix 31
31
C
712 725Right-handed alpha
Helix 32
32
C
732 745Right-handed alpha
Helix 33
33
C
747 758Right-handed alpha
Helix 34
34
C
764 775Right-handed alpha
Helix 35
35
C
788 797Right-handed alpha
Helix 36
36
C
799 824Right-handed alpha
Helix 37
37
D
36 42Right-handed alpha
Helix 38
38
E
680 685Right-handed alpha
Helix 39
39
E
687 691Right-handed 310
Helix 40
40
E
706 710Right-handed 310
Helix 41
41
E
712 725Right-handed alpha
Helix 42
42
E
732 745Right-handed alpha
Helix 43
43
E
747 758Right-handed alpha
Helix 44
44
E
764 775Right-handed alpha
Helix 45
45
E
788 797Right-handed alpha
Helix 46
46
E
799 824Right-handed alpha
Helix 47
47
F
36 42Right-handed alpha
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There are 2 sheets in PDB entry 4BJ5. Click on sheet of interest to get list of strands forming it: AA, BA,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 144first strand
Strand 2
A
206 214parallel
Strand 3
A
245 253parallel
Strand 4
A
109 114parallel
Strand 5
A
274 278parallel
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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
139 144first strand
Strand 2
B
206 214parallel
Strand 3
B
245 253parallel
Strand 4
B
109 114parallel
Strand 5
B
274 278parallel
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