Analysis of interatomic Contacts of Structural Units in PDB entry:
4BJQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4BJQ entry

There are 8 chains in PDB entry 4BJQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 88SER 165
B
 VAL 88SER 165
C
 VAL 88SER 165
D
 VAL 88SER 165
E
 VAL 88GLU 164
F
 VAL 88SER 165
G
 VAL 88GLU 164
H
 VAL 88GLU 164
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 4BJQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
94 101Right-handed alpha
Helix 2
2
A
105 118Right-handed alpha
Helix 3
3
A
120 130Right-handed alpha
Helix 4
4
A
144 154Right-handed alpha
Helix 5
5
B
94 101Right-handed alpha
Helix 6
6
B
105 118Right-handed alpha
Helix 7
7
B
120 130Right-handed alpha
Helix 8
8
B
144 154Right-handed alpha
Helix 9
9
C
94 101Right-handed alpha
Helix 10
10
C
105 117Right-handed alpha
Helix 11
11
C
120 130Right-handed alpha
Helix 12
12
C
144 154Right-handed alpha
Helix 13
13
D
94 101Right-handed alpha
Helix 14
14
D
105 118Right-handed alpha
Helix 15
15
D
120 129Right-handed alpha
Helix 16
16
D
144 153Right-handed alpha
Helix 17
17
E
94 101Right-handed alpha
Helix 18
18
E
105 117Right-handed alpha
Helix 19
19
E
120 130Right-handed alpha
Helix 20
20
E
144 154Right-handed alpha
Helix 21
21
F
94 101Right-handed alpha
Helix 22
22
F
105 117Right-handed alpha
Helix 23
23
F
120 129Right-handed alpha
Helix 24
24
F
144 154Right-handed alpha
Helix 25
25
G
94 101Right-handed alpha
Helix 26
26
G
105 118Right-handed alpha
Helix 27
27
G
120 130Right-handed alpha
Helix 28
28
G
144 154Right-handed alpha
Helix 29
29
H
94 101Right-handed alpha
Helix 30
30
H
105 117Right-handed alpha
Helix 31
31
H
120 130Right-handed alpha
Helix 32
32
H
144 154Right-handed alpha
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There are 6 sheets in PDB entry 4BJQ. Click on sheet of interest to get list of strands forming it: CA, AA, EA, BA, HA, A,

There are 3 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
137 143first strand
Strand 2
A
89 93anti-parallel
Strand 3
C
159 163anti-parallel
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There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
137 143first strand
Strand 2
C
89 93anti-parallel
Strand 3
A
159 163anti-parallel
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There are 3 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
137 143first strand
Strand 2
B
89 93anti-parallel
Strand 3
E
159 163anti-parallel
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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
159 163first strand
Strand 2
E
89 93anti-parallel
Strand 3
B
137 143anti-parallel
Strand 4
F
163 164anti-parallel
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There are 3 strands in HA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
137 143first strand
Strand 2
D
89 93anti-parallel
Strand 3
H
159 163anti-parallel
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There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
137 140first strand
Strand 2
H
89 93anti-parallel
Strand 3
D
159 163anti-parallel
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