Analysis of interatomic Contacts of Structural Units in PDB entry:
4BJR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4BJR entry

There are 2 chains in PDB entry 4BJR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 3GLU 515
B
 THR 3GLU 515
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 4BJR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 7Right-handed 310
Helix 2
2
A
32 41Right-handed alpha
Helix 3
3
A
41 49Right-handed alpha
Helix 4
4
A
78 107Right-handed alpha
Helix 5
5
A
140 147Right-handed alpha
Helix 6
6
A
147 155Right-handed alpha
Helix 7
7
A
155 160Right-handed alpha
Helix 8
8
A
185 195Right-handed alpha
Helix 9
9
A
230 251Right-handed alpha
Helix 10
10
A
265 272Right-handed alpha
Helix 11
11
A
289 307Right-handed alpha
Helix 12
12
A
316 337Right-handed alpha
Helix 13
13
A
346 363Right-handed alpha
Helix 14
14
A
368 378Right-handed alpha
Helix 15
15
A
386 395Right-handed alpha
Helix 16
16
A
402 412Right-handed alpha
Helix 17
17
A
418 433Right-handed alpha
Helix 18
18
A
463 477Right-handed alpha
Helix 19
19
A
483 498Right-handed alpha
Helix 20
20
A
501 509Right-handed alpha
Helix 21
21
B
32 41Right-handed alpha
Helix 22
22
B
41 49Right-handed alpha
Helix 23
23
B
78 107Right-handed alpha
Helix 24
24
B
140 147Right-handed alpha
Helix 25
25
B
147 155Right-handed alpha
Helix 26
26
B
155 160Right-handed alpha
Helix 27
27
B
185 195Right-handed alpha
Helix 28
28
B
230 251Right-handed alpha
Helix 29
29
B
265 272Right-handed alpha
Helix 30
30
B
289 307Right-handed alpha
Helix 31
31
B
316 337Right-handed alpha
Helix 32
32
B
346 363Right-handed alpha
Helix 33
33
B
368 378Right-handed alpha
Helix 34
34
B
386 395Right-handed alpha
Helix 35
35
B
402 412Right-handed alpha
Helix 36
36
B
418 433Right-handed alpha
Helix 37
37
B
463 477Right-handed alpha
Helix 38
38
B
489 498Right-handed alpha
Helix 39
39
B
501 509Right-handed alpha
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There are 10 sheets in PDB entry 4BJR. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, BA, BB, BC, BD, BE,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 54first strand
Strand 2
A
60 63anti-parallel
Strand 3
A
69 72anti-parallel
Strand 4
A
13 18anti-parallel
Strand 5
A
129 136anti-parallel
Strand 6
A
217 222anti-parallel
Strand 7
A
204 205anti-parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 31first strand
Strand 2
A
20 25anti-parallel
Strand 3
A
112 116anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
163 165first strand
Strand 2
A
179 181anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
278 280first strand
Strand 2
A
286 288anti-parallel
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There are 3 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
436 438first strand
Strand 2
A
442 445anti-parallel
Strand 3
A
451 454anti-parallel
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There are 7 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 54first strand
Strand 2
B
60 63anti-parallel
Strand 3
B
69 72anti-parallel
Strand 4
B
13 18anti-parallel
Strand 5
B
129 136anti-parallel
Strand 6
B
217 222anti-parallel
Strand 7
B
204 205anti-parallel
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There are 3 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
28 31first strand
Strand 2
B
20 25anti-parallel
Strand 3
B
112 116anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
163 165first strand
Strand 2
B
179 181anti-parallel
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There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
278 280first strand
Strand 2
B
286 288anti-parallel
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There are 3 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
436 438first strand
Strand 2
B
442 445anti-parallel
Strand 3
B
451 454anti-parallel
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