Analysis of interatomic Contacts of Structural Units in PDB entry:
4BMH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4BMH entry

There is 1 chain in PDB entry 4BMH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 56GLU 259
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 14 helices in PDB entry 4BMH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
64 66Right-handed 310
Helix 2
2
A
67 79Right-handed alpha
Helix 3
3
A
85 89Right-handed 310
Helix 4
4
A
93 100Right-handed alpha
Helix 5
5
A
100 107Right-handed alpha
Helix 6
6
A
108 110Right-handed 310
Helix 7
7
A
130 142Right-handed alpha
Helix 8
8
A
142 147Right-handed alpha
Helix 9
9
A
159 169Right-handed alpha
Helix 10
10
A
170 175Right-handed 310
Helix 11
11
A
176 180Right-handed 310
Helix 12
12
A
192 195Right-handed 310
Helix 13
13
A
198 214Right-handed alpha
Helix 14
14
A
227 237Right-handed alpha
Back to top of page

There is 1 sheet ( AA) in PDB entry 4BMH.

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 62first strand
Strand 2
A
112 115anti-parallel
Strand 3
A
121 128anti-parallel
Strand 4
A
184 190anti-parallel
Strand 5
A
218 224parallel
Strand 6
A
250 256anti-parallel
Strand 7
A
240 243anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il