Analysis of interatomic Contacts of Structural Units in PDB entry:
4BN0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4BN0 entry

There are 4 chains in PDB entry 4BN0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 0LEU 231
B
 VAL 2LEU 231
C
 SER -1LEU 231
D
 VAL 2LEU 231
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 4BN0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 13Right-handed 310
Helix 2
2
A
14 23Right-handed alpha
Helix 3
3
A
54 70Right-handed alpha
Helix 4
4
A
105 109Right-handed 310
Helix 5
5
A
125 139Right-handed alpha
Helix 6
6
A
157 169Right-handed alpha
Helix 7
7
A
176 188Right-handed alpha
Helix 8
8
A
208 230Right-handed alpha
Helix 9
9
B
11 13Right-handed 310
Helix 10
10
B
14 23Right-handed alpha
Helix 11
11
B
54 70Right-handed alpha
Helix 12
12
B
105 109Right-handed 310
Helix 13
13
B
125 139Right-handed alpha
Helix 14
14
B
157 169Right-handed alpha
Helix 15
15
B
176 188Right-handed alpha
Helix 16
16
B
215 231Right-handed alpha
Helix 17
17
C
11 13Right-handed 310
Helix 18
18
C
14 23Right-handed alpha
Helix 19
19
C
54 70Right-handed alpha
Helix 20
20
C
105 109Right-handed 310
Helix 21
21
C
125 138Right-handed alpha
Helix 22
22
C
157 169Right-handed alpha
Helix 23
23
C
176 188Right-handed alpha
Helix 24
24
C
214 229Right-handed alpha
Helix 25
25
D
11 13Right-handed 310
Helix 26
26
D
14 23Right-handed alpha
Helix 27
27
D
53 70Right-handed alpha
Helix 28
28
D
105 109Right-handed 310
Helix 29
29
D
125 138Right-handed alpha
Helix 30
30
D
157 169Right-handed alpha
Helix 31
31
D
176 187Right-handed alpha
Helix 32
32
D
208 230Right-handed alpha
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There are 7 sheets in PDB entry 4BN0. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB, CA, CB, A,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 31first strand
Strand 2
A
34 41anti-parallel
Strand 3
A
44 50anti-parallel
Strand 4
A
3 9parallel
Strand 5
A
73 82parallel
Strand 6
A
191 197parallel
Strand 7
A
92 100anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 31first strand
Strand 2
A
73 82parallel
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There are 7 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
27 31first strand
Strand 2
B
34 41anti-parallel
Strand 3
B
44 50anti-parallel
Strand 4
B
3 9parallel
Strand 5
B
73 82parallel
Strand 6
B
191 199parallel
Strand 7
B
92 100anti-parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
27 31first strand
Strand 2
B
73 82parallel
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There are 10 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
27 31first strand
Strand 2
C
34 41anti-parallel
Strand 3
C
44 50anti-parallel
Strand 4
C
3 9parallel
Strand 5
C
73 77parallel
Strand 6
C
191 197parallel
Strand 7
C
79 82parallel
Strand 8
C
172 174anti-parallel
Strand 9
C
143 150parallel
Strand 10
C
92 100parallel
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There are 2 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
27 31first strand
Strand 2
C
191 197parallel
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There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
27 31first strand
Strand 2
D
34 41anti-parallel
Strand 3
D
44 50anti-parallel
Strand 4
D
3 9parallel
Strand 5
D
73 82parallel
Strand 6
D
122 123first strand
Strand 7
D
92 100anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il