Analysis of interatomic Contacts of Structural Units in PDB entry:
4BN5

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4BN5 entry

There are 5 chains in PDB entry 4BN5 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 122	LEU 394
B	LYS 122	LEU 394
C	LYS 122	LEU 394
D	LYS 122	LYS 393
E	LYS 122	LEU 318

There are194 helices in PDB entry 4BN5. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	124	134	Right-handed alpha
Helix 2	2	A	162	171	Right-handed alpha
Helix 3	3	A	175	180	Right-handed 310
Helix 4	4	A	181	188	Right-handed alpha
Helix 5	5	A	189	200	Right-handed alpha
Helix 6	6	A	207	219	Right-handed alpha
Helix 7	7	A	232	237	Right-handed alpha
Helix 8	8	A	265	274	Right-handed alpha
Helix 9	9	A	299	303	Right-handed 310
Helix 10	10	A	304	312	Right-handed alpha
Helix 11	11	A	326	331	Right-handed alpha
Helix 12	12	A	349	354	Right-handed alpha
Helix 13	13	A	365	378	Right-handed alpha
Helix 14	14	A	379	393	Right-handed alpha
Helix 15	15	B	124	134	Right-handed alpha
Helix 16	16	B	145	150	Right-handed alpha
Helix 17	17	B	151	153	Right-handed 310
Helix 18	18	B	162	171	Right-handed alpha
Helix 19	19	B	175	180	Right-handed 310
Helix 20	20	B	181	188	Right-handed alpha
Helix 21	21	B	189	200	Right-handed alpha
Helix 22	22	B	207	219	Right-handed alpha
Helix 23	23	B	232	237	Right-handed alpha
Helix 24	24	B	240	242	Right-handed 310
Helix 25	25	B	265	274	Right-handed alpha
Helix 26	26	B	299	303	Right-handed 310
Helix 27	27	B	304	312	Right-handed alpha
Helix 28	28	B	326	331	Right-handed alpha
Helix 29	29	B	349	354	Right-handed alpha
Helix 30	30	B	365	378	Right-handed alpha
Helix 31	31	B	379	394	Right-handed alpha
Helix 32	32	C	124	135	Right-handed alpha
Helix 33	33	C	145	150	Right-handed 310
Helix 34	34	C	162	171	Right-handed alpha
Helix 35	35	C	176	180	Right-handed 310
Helix 36	36	C	181	188	Right-handed alpha
Helix 37	37	C	189	200	Right-handed alpha
Helix 38	38	C	207	220	Right-handed alpha
Helix 39	39	C	232	237	Right-handed alpha
Helix 40	40	C	240	242	Right-handed 310
Helix 41	41	C	268	274	Right-handed alpha
Helix 42	42	C	299	303	Right-handed 310
Helix 43	43	C	304	312	Right-handed alpha
Helix 44	44	C	326	331	Right-handed alpha
Helix 45	45	C	332	334	Right-handed 310
Helix 46	46	C	348	354	Right-handed alpha
Helix 47	47	C	365	377	Right-handed alpha
Helix 48	48	C	379	394	Right-handed alpha
Helix 49	49	D	124	134	Right-handed alpha
Helix 50	50	D	162	170	Right-handed alpha
Helix 51	51	D	175	179	Right-handed 310
Helix 52	52	D	181	188	Right-handed alpha
Helix 53	53	D	189	200	Right-handed alpha
Helix 54	54	D	207	219	Right-handed alpha
Helix 55	55	D	232	238	Right-handed alpha
Helix 56	56	D	240	242	Right-handed 310
Helix 57	57	D	268	273	Right-handed alpha
Helix 58	58	D	299	303	Right-handed 310
Helix 59	59	D	304	312	Right-handed alpha
Helix 60	60	D	326	331	Right-handed alpha
Helix 61	61	D	348	353	Right-handed alpha
Helix 62	62	D	365	377	Right-handed alpha
Helix 63	63	D	380	391	Right-handed alpha
Helix 64	64	E	124	134	Right-handed alpha
Helix 65	65	E	146	149	Right-handed 310
Helix 66	66	E	162	169	Right-handed alpha
Helix 67	67	E	170	172	Right-handed 310
Helix 68	68	E	175	179	Right-handed 310
Helix 69	69	E	181	188	Right-handed alpha
Helix 70	70	E	189	200	Right-handed alpha
Helix 71	71	E	207	219	Right-handed alpha
Helix 72	72	E	232	237	Right-handed alpha
Helix 73	73	E	240	242	Right-handed 310
Helix 74	74	E	268	275	Right-handed alpha
Helix 75	75	E	299	303	Right-handed 310
Helix 76	76	E	304	309	Right-handed alpha
Helix 77	77	E	310	312	Right-handed 310
Helix 78	78	E	326	331	Right-handed alpha
Helix 79	79	E	348	352	Right-handed 310
Helix 80	80	E	365	377	Right-handed alpha
Helix 81	81	E	379	393	Right-handed alpha
Helix 82	82	F	124	134	Right-handed alpha
Helix 83	83	F	146	150	Right-handed 310
Helix 84	84	F	162	170	Right-handed alpha
Helix 85	85	F	175	180	Right-handed 310
Helix 86	86	F	181	188	Right-handed alpha
Helix 87	87	F	189	200	Right-handed alpha
Helix 88	88	F	207	219	Right-handed alpha
Helix 89	89	F	232	237	Right-handed alpha
Helix 90	90	F	240	242	Right-handed 310
Helix 91	91	F	265	274	Right-handed alpha
Helix 92	92	F	299	303	Right-handed 310
Helix 93	93	F	304	312	Right-handed alpha
Helix 94	94	F	326	331	Right-handed alpha
Helix 95	95	F	348	354	Right-handed alpha
Helix 96	96	F	365	378	Right-handed alpha
Helix 97	97	F	379	392	Right-handed alpha
Helix 98	98	G	124	134	Right-handed alpha
Helix 99	99	G	146	150	Right-handed 310
Helix 100	100	G	162	170	Right-handed alpha
Helix 101	101	G	175	180	Right-handed 310
Helix 102	102	G	181	188	Right-handed alpha
Helix 103	103	G	189	200	Right-handed alpha
Helix 104	104	G	209	219	Right-handed alpha
Helix 105	105	G	232	237	Right-handed alpha
Helix 106	106	G	240	242	Right-handed 310
Helix 107	107	G	265	267	Right-handed 310
Helix 108	108	G	268	273	Right-handed alpha
Helix 109	109	G	299	303	Right-handed 310
Helix 110	110	G	304	309	Right-handed alpha
Helix 111	111	G	326	334	Right-handed alpha
Helix 112	112	G	349	354	Right-handed alpha
Helix 113	113	G	365	377	Right-handed alpha
Helix 114	114	G	379	392	Right-handed alpha
Helix 115	115	H	124	134	Right-handed alpha
Helix 116	116	H	146	149	Right-handed 310
Helix 117	117	H	162	170	Right-handed alpha
Helix 118	118	H	175	180	Right-handed 310
Helix 119	119	H	181	186	Right-handed alpha
Helix 120	120	H	189	200	Right-handed alpha
Helix 121	121	H	209	219	Right-handed alpha
Helix 122	122	H	232	237	Right-handed alpha
Helix 123	123	H	240	242	Right-handed 310
Helix 124	124	H	265	273	Right-handed alpha
Helix 125	125	H	299	303	Right-handed 310
Helix 126	126	H	304	309	Right-handed alpha
Helix 127	127	H	326	334	Right-handed alpha
Helix 128	128	H	365	378	Right-handed alpha
Helix 129	129	H	379	392	Right-handed alpha
Helix 130	130	I	124	134	Right-handed alpha
Helix 131	131	I	146	150	Right-handed 310
Helix 132	132	I	162	168	Right-handed alpha
Helix 133	133	I	175	181	Right-handed 310
Helix 134	134	I	189	200	Right-handed alpha
Helix 135	135	I	207	219	Right-handed alpha
Helix 136	136	I	232	239	Right-handed alpha
Helix 137	137	I	240	242	Right-handed 310
Helix 138	138	I	265	273	Right-handed alpha
Helix 139	139	I	300	303	Right-handed 310
Helix 140	140	I	304	309	Right-handed alpha
Helix 141	141	I	310	312	Right-handed 310
Helix 142	142	I	326	332	Right-handed alpha
Helix 143	143	I	365	377	Right-handed alpha
Helix 144	144	I	379	392	Right-handed alpha
Helix 145	145	J	124	134	Right-handed alpha
Helix 146	146	J	146	149	Right-handed 310
Helix 147	147	J	162	170	Right-handed alpha
Helix 148	148	J	175	180	Right-handed 310
Helix 149	149	J	181	188	Right-handed alpha
Helix 150	150	J	189	200	Right-handed alpha
Helix 151	151	J	207	219	Right-handed alpha
Helix 152	152	J	232	237	Right-handed alpha
Helix 153	153	J	240	242	Right-handed 310
Helix 154	154	J	265	274	Right-handed alpha
Helix 155	155	J	299	303	Right-handed 310
Helix 156	156	J	304	312	Right-handed alpha
Helix 157	157	J	326	331	Right-handed alpha
Helix 158	158	J	348	354	Right-handed alpha
Helix 159	159	J	365	378	Right-handed alpha
Helix 160	160	J	379	392	Right-handed alpha
Helix 161	161	K	124	134	Right-handed alpha
Helix 162	162	K	145	150	Right-handed alpha
Helix 163	163	K	151	153	Right-handed 310
Helix 164	164	K	162	168	Right-handed alpha
Helix 165	165	K	175	179	Right-handed 310
Helix 166	166	K	181	188	Right-handed alpha
Helix 167	167	K	189	199	Right-handed alpha
Helix 168	168	K	207	219	Right-handed alpha
Helix 169	169	K	232	238	Right-handed alpha
Helix 170	170	K	240	242	Right-handed 310
Helix 171	171	K	265	274	Right-handed alpha
Helix 172	172	K	299	303	Right-handed 310
Helix 173	173	K	304	309	Right-handed alpha
Helix 174	174	K	310	312	Right-handed 310
Helix 175	175	K	326	331	Right-handed alpha
Helix 176	176	K	349	354	Right-handed alpha
Helix 177	177	K	365	376	Right-handed alpha
Helix 178	178	K	379	394	Right-handed alpha
Helix 179	179	L	124	134	Right-handed alpha
Helix 180	180	L	146	153	Right-handed 310
Helix 181	181	L	162	170	Right-handed alpha
Helix 182	182	L	175	180	Right-handed 310
Helix 183	183	L	181	186	Right-handed alpha
Helix 184	184	L	189	200	Right-handed alpha
Helix 185	185	L	207	218	Right-handed alpha
Helix 186	186	L	232	238	Right-handed alpha
Helix 187	187	L	240	242	Right-handed 310
Helix 188	188	L	265	274	Right-handed alpha
Helix 189	189	L	299	303	Right-handed 310
Helix 190	190	L	304	309	Right-handed alpha
Helix 191	191	L	326	332	Right-handed alpha
Helix 192	192	L	349	354	Right-handed alpha
Helix 193	193	L	365	378	Right-handed alpha
Helix 194	194	L	379	394	Right-handed alpha

There are 24 sheets in PDB entry 4BN5. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB, CA, CB, A, DB, EA, EB, FA, FB, GA, GB, HA, HB, IA, IB, JA, JB, KA, KB, LA, LB,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	244	246	first strand
Strand 2	A	222	227	parallel
Strand 3	A	140	144	parallel
Strand 4	A	314	318	parallel
Strand 5	A	340	344	parallel
Strand 6	A	360	363	parallel

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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	253	255	first strand
Strand 2	A	262	264	anti-parallel

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There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	244	246	first strand
Strand 2	B	222	227	parallel
Strand 3	B	140	144	parallel
Strand 4	B	314	318	parallel
Strand 5	B	340	344	parallel
Strand 6	B	360	363	parallel

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There are 3 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	262	264	first strand
Strand 2	B	249	256	anti-parallel
Strand 3	B	287	291	anti-parallel

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There are 6 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	244	246	first strand
Strand 2	C	222	227	parallel
Strand 3	C	140	144	parallel
Strand 4	C	314	318	parallel
Strand 5	C	340	343	parallel
Strand 6	C	359	361	parallel

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There are 3 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	262	264	first strand
Strand 2	C	249	256	anti-parallel
Strand 3	C	287	291	anti-parallel

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There are 6 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	244	246	first strand
Strand 2	D	222	227	parallel
Strand 3	D	140	144	parallel
Strand 4	D	314	318	parallel
Strand 5	D	340	343	parallel
Strand 6	D	359	361	parallel

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There are 3 strands in DB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	262	264	first strand
Strand 2	D	249	256	anti-parallel
Strand 3	D	287	291	anti-parallel

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There are 6 strands in EA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	244	246	first strand
Strand 2	E	222	227	parallel
Strand 3	E	140	144	parallel
Strand 4	E	314	318	parallel
Strand 5	E	340	344	parallel
Strand 6	E	359	363	parallel

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There are 3 strands in EB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	262	264	first strand
Strand 2	E	249	256	anti-parallel
Strand 3	E	287	291	anti-parallel

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There are 6 strands in FA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	244	246	first strand
Strand 2	F	222	227	parallel
Strand 3	F	140	144	parallel
Strand 4	F	314	318	parallel
Strand 5	F	340	344	parallel
Strand 6	F	359	363	parallel

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There are 3 strands in FB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	262	264	first strand
Strand 2	F	249	256	anti-parallel
Strand 3	F	287	291	anti-parallel

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There are 6 strands in GA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	244	246	first strand
Strand 2	G	222	227	parallel
Strand 3	G	140	144	parallel
Strand 4	G	314	318	parallel
Strand 5	G	340	344	parallel
Strand 6	G	360	363	parallel

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There are 2 strands in GB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	249	256	first strand
Strand 2	G	287	291	anti-parallel

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There are 6 strands in HA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	244	246	first strand
Strand 2	H	222	227	parallel
Strand 3	H	140	144	parallel
Strand 4	H	314	318	parallel
Strand 5	H	340	343	parallel
Strand 6	H	359	361	parallel

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There are 3 strands in HB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	262	264	first strand
Strand 2	H	249	256	anti-parallel
Strand 3	H	287	291	anti-parallel

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There are 6 strands in IA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	244	246	first strand
Strand 2	I	222	227	parallel
Strand 3	I	140	144	parallel
Strand 4	I	314	318	parallel
Strand 5	I	340	344	parallel
Strand 6	I	360	363	parallel

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There are 3 strands in IB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	262	264	first strand
Strand 2	I	249	256	anti-parallel
Strand 3	I	287	291	anti-parallel

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There are 6 strands in JA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	244	246	first strand
Strand 2	J	222	227	parallel
Strand 3	J	140	144	parallel
Strand 4	J	314	318	parallel
Strand 5	J	340	344	parallel
Strand 6	J	360	363	parallel

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There are 3 strands in JB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	262	264	first strand
Strand 2	J	249	256	anti-parallel
Strand 3	J	287	291	anti-parallel

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There are 6 strands in KA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	244	246	first strand
Strand 2	K	222	227	parallel
Strand 3	K	140	144	parallel
Strand 4	K	314	318	parallel
Strand 5	K	340	344	parallel
Strand 6	K	359	363	parallel

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There are 3 strands in KB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	262	264	first strand
Strand 2	K	249	256	anti-parallel
Strand 3	K	287	291	anti-parallel

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There are 6 strands in LA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	244	246	first strand
Strand 2	L	222	227	parallel
Strand 3	L	140	144	parallel
Strand 4	L	315	318	parallel
Strand 5	L	340	343	parallel
Strand 6	L	360	361	parallel

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There are 3 strands in LB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	262	264	first strand
Strand 2	L	249	256	anti-parallel
Strand 3	L	287	291	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4BN5

Analysis of interatomic Contacts of Structural Units in PDB entry:
4BN5