Analysis of interatomic Contacts of Structural Units in PDB entry:
4BOZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4BOZ entry

There are 5 chains in PDB entry 4BOZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 147ARG 308
B
 MET 1GLY 76
C
 MET 1LEU 71
D
 PRO 147THR 311
E
 MET 1GLY 76
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 4BOZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
159 170Right-handed alpha
Helix 2
2
A
178 192Right-handed alpha
Helix 3
3
A
198 203Right-handed alpha
Helix 4
4
A
205 214Right-handed alpha
Helix 5
5
A
221 232Right-handed alpha
Helix 6
6
A
291 308Right-handed alpha
Helix 7
7
B
22 35Right-handed alpha
Helix 8
8
C
22 34Right-handed alpha
Helix 9
9
C
37 41Right-handed 310
Helix 10
10
C
56 60Right-handed 310
Helix 11
11
D
159 170Right-handed alpha
Helix 12
12
D
175 177Right-handed 310
Helix 13
13
D
178 192Right-handed alpha
Helix 14
14
D
198 203Right-handed alpha
Helix 15
15
D
205 215Right-handed alpha
Helix 16
16
D
221 233Right-handed alpha
Helix 17
17
D
250 254Right-handed 310
Helix 18
18
D
290 307Right-handed alpha
Helix 19
19
E
22 35Right-handed alpha
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There are 9 sheets in PDB entry 4BOZ. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, CA, A, DB, C, EA,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
148 151first strand
Strand 2
A
268 274anti-parallel
Strand 3
A
257 263anti-parallel
Strand 4
A
285 287anti-parallel
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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
148 151first strand
Strand 2
A
268 274anti-parallel
Strand 3
A
257 263anti-parallel
Strand 4
A
235 240parallel
Strand 5
A
246 249anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
285 287first strand
Strand 2
A
257 263anti-parallel
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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
12 16first strand
Strand 2
B
2 7anti-parallel
Strand 3
B
66 69parallel
Strand 4
B
43 44anti-parallel
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There are 5 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
12 16first strand
Strand 2
C
2 7anti-parallel
Strand 3
C
66 70parallel
Strand 4
C
42 45anti-parallel
Strand 5
C
48 49anti-parallel
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There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
148 151first strand
Strand 2
D
268 274anti-parallel
Strand 3
D
257 263anti-parallel
Strand 4
D
286 287anti-parallel
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There are 5 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
148 151first strand
Strand 2
D
268 274anti-parallel
Strand 3
D
257 263anti-parallel
Strand 4
D
235 240parallel
Strand 5
D
245 249anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
286 287first strand
Strand 2
D
257 263anti-parallel
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There are 5 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
12 16first strand
Strand 2
E
2 7anti-parallel
Strand 3
E
66 71parallel
Strand 4
E
41 45anti-parallel
Strand 5
E
48 49anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il