Analysis of interatomic Contacts of Structural Units in PDB entry:
4BPK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4BPK entry

There are 14 chains in PDB entry 4BPK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1TYR 195
B
 SER 2TYR 195
C
 ALA 2ARG 3
C
 ILE 5ALA 7
C
 ARG 10ARG 10
C
 MET 12ASP 14
C
 LEU 16ASN 17
C
 GLN 19TYR 20
D
 ALA 2ARG 3
D
 ILE 5ALA 7
D
 ARG 10ARG 10
D
 MET 12ASP 14
D
 LEU 16ASN 17
D
 GLN 19TYR 20
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 20 helices in PDB entry 4BPK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1 20Right-handed alpha
Helix 2
2
A
25 101Right-handed alpha
Helix 3
3
A
101 110Right-handed alpha
Helix 4
4
A
118 131Right-handed alpha
Helix 5
5
A
136 157Right-handed alpha
Helix 6
6
A
161 178Right-handed alpha
Helix 7
7
A
178 185Right-handed alpha
Helix 8
8
A
187 195Right-handed alpha
Helix 9
9
B
2 20Right-handed alpha
Helix 10
10
B
25 101Right-handed alpha
Helix 11
11
B
101 110Right-handed alpha
Helix 12
12
B
118 131Right-handed alpha
Helix 13
13
B
136 157Right-handed alpha
Helix 14
14
B
161 178Right-handed alpha
Helix 15
15
B
178 185Right-handed alpha
Helix 16
16
B
186 195Right-handed alpha
Helix 17
17
C
1 10Right-handed alpha
Helix 18
18
C
12 17Right-handed alpha
Helix 19
19
D
1 10Right-handed alpha
Helix 20
20
D
12 17Right-handed alpha
Back to top of page
There are no sheets in PDB entry 4BPK
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il