Analysis of interatomic Contacts of Structural Units in PDB entry:
4BPY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4BPY entry

There are 2 chains in PDB entry 4BPY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 42HIS 85
A
 PRO 87PRO 216
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 4BPY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
68 72Right-handed alpha
Helix 2
2
A
88 103Right-handed alpha
Helix 3
3
A
105 112Right-handed alpha
Helix 4
4
A
125 135Right-handed alpha
Helix 5
5
A
146 156Right-handed alpha
Helix 6
6
A
199 212Right-handed alpha
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There is 1 sheet ( AA) in PDB entry 4BPY.

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 51first strand
Strand 2
A
190 194anti-parallel
Strand 3
A
180 183anti-parallel
Strand 4
A
77 82anti-parallel
Strand 5
A
113 118parallel
Strand 6
A
141 144parallel
Strand 7
A
57 60anti-parallel
Strand 8
A
65 67anti-parallel
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