Analysis of interatomic Contacts of Structural Units in PDB entry:
4BQM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4BQM entry

There are 2 chains in PDB entry 4BQM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU -5ASN 465
B
 LEU -5ASN 465
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 4BQM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
-5 154Right-handed alpha
Helix 2
2
A
156 172Right-handed alpha
Helix 3
3
A
218 220Right-handed 310
Helix 4
4
A
221 234Right-handed alpha
Helix 5
5
A
234 239Right-handed alpha
Helix 6
6
A
267 278Right-handed alpha
Helix 7
7
A
283 299Right-handed alpha
Helix 8
8
A
307 318Right-handed alpha
Helix 9
9
A
318 331Right-handed alpha
Helix 10
10
A
339 352Right-handed alpha
Helix 11
11
A
356 369Right-handed alpha
Helix 12
12
A
382 397Right-handed alpha
Helix 13
13
A
398 400Right-handed 310
Helix 14
14
A
401 409Right-handed alpha
Helix 15
15
A
444 459Right-handed alpha
Helix 16
16
B
-5 154Right-handed alpha
Helix 17
17
B
156 172Right-handed alpha
Helix 18
18
B
186 190Right-handed 310
Helix 19
19
B
218 220Right-handed 310
Helix 20
20
B
221 234Right-handed alpha
Helix 21
21
B
234 239Right-handed alpha
Helix 22
22
B
267 277Right-handed alpha
Helix 23
23
B
283 299Right-handed alpha
Helix 24
24
B
307 318Right-handed alpha
Helix 25
25
B
318 331Right-handed alpha
Helix 26
26
B
339 352Right-handed alpha
Helix 27
27
B
356 369Right-handed alpha
Helix 28
28
B
382 397Right-handed alpha
Helix 29
29
B
398 400Right-handed 310
Helix 30
30
B
401 409Right-handed alpha
Helix 31
31
B
444 459Right-handed alpha
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There are 5 sheets in PDB entry 4BQM. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB, BC,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
205 209first strand
Strand 2
A
195 200anti-parallel
Strand 3
A
429 434anti-parallel
Strand 4
A
420 425anti-parallel
Strand 5
A
413 415anti-parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
215 216first strand
Strand 2
A
353 355anti-parallel
Strand 3
A
305 306anti-parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
178 179first strand
Strand 2
B
437 438anti-parallel
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There are 5 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
205 209first strand
Strand 2
B
195 200anti-parallel
Strand 3
B
429 434anti-parallel
Strand 4
B
420 425anti-parallel
Strand 5
B
413 415anti-parallel
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There are 3 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
215 216first strand
Strand 2
B
353 355anti-parallel
Strand 3
B
305 306anti-parallel
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