Analysis of interatomic Contacts of Structural Units in PDB entry:
4BRO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4BRO entry

There are 2 chains in PDB entry 4BRO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 37LEU 394
B
 PRO 38ARG 392
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 33 helices in PDB entry 4BRO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
37 42Right-handed alpha
Helix 2
2
A
84 88Right-handed 310
Helix 3
3
A
91 104Right-handed alpha
Helix 4
4
A
118 123Right-handed alpha
Helix 5
5
A
125 142Right-handed alpha
Helix 6
6
A
155 171Right-handed alpha
Helix 7
7
A
205 207Right-handed 310
Helix 8
8
A
230 236Right-handed alpha
Helix 9
9
A
241 245Right-handed 310
Helix 10
10
A
260 275Right-handed alpha
Helix 11
11
A
277 289Right-handed alpha
Helix 12
12
A
299 305Right-handed alpha
Helix 13
13
A
317 329Right-handed alpha
Helix 14
14
A
333 341Right-handed alpha
Helix 15
15
A
346 348Right-handed 310
Helix 16
16
A
349 363Right-handed alpha
Helix 17
17
A
385 392Right-handed alpha
Helix 18
18
B
84 88Right-handed 310
Helix 19
19
B
91 104Right-handed alpha
Helix 20
20
B
118 123Right-handed alpha
Helix 21
21
B
125 142Right-handed alpha
Helix 22
22
B
155 171Right-handed alpha
Helix 23
23
B
205 207Right-handed 310
Helix 24
24
B
230 236Right-handed alpha
Helix 25
25
B
241 245Right-handed 310
Helix 26
26
B
260 273Right-handed alpha
Helix 27
27
B
277 289Right-handed alpha
Helix 28
28
B
299 305Right-handed alpha
Helix 29
29
B
317 329Right-handed alpha
Helix 30
30
B
333 341Right-handed alpha
Helix 31
31
B
346 348Right-handed 310
Helix 32
32
B
349 362Right-handed alpha
Helix 33
33
B
385 392Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 4BRO. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 81first strand
Strand 2
A
55 64anti-parallel
Strand 3
A
43 50anti-parallel
Strand 4
A
111 117parallel
Strand 5
A
146 153parallel
Back to list of sheets
Back to top of page

There are 7 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
209 213first strand
Strand 2
A
218 227anti-parallel
Strand 3
A
191 197anti-parallel
Strand 4
A
182 187anti-parallel
Strand 5
A
293 298parallel
Strand 6
A
373 375parallel
Strand 7
A
315 316anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
70 81first strand
Strand 2
B
55 64anti-parallel
Strand 3
B
43 50anti-parallel
Strand 4
B
111 117parallel
Strand 5
B
146 153parallel
Back to list of sheets
Back to top of page

There are 7 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
209 214first strand
Strand 2
B
217 227anti-parallel
Strand 3
B
191 197anti-parallel
Strand 4
B
182 187anti-parallel
Strand 5
B
293 298parallel
Strand 6
B
373 375parallel
Strand 7
B
315 316anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il