Analysis of interatomic Contacts of Structural Units in PDB entry:
4BRP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4BRP entry

There are 4 chains in PDB entry 4BRP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 38ARG 392
B
 PRO 38HIS 391
C
 ASN 37ALA 393
D
 PRO 38ALA 246
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 68 helices in PDB entry 4BRP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
84 88Right-handed 310
Helix 2
2
A
91 104Right-handed alpha
Helix 3
3
A
118 123Right-handed alpha
Helix 4
4
A
125 142Right-handed alpha
Helix 5
5
A
155 172Right-handed alpha
Helix 6
6
A
205 207Right-handed 310
Helix 7
7
A
230 236Right-handed alpha
Helix 8
8
A
241 245Right-handed 310
Helix 9
9
A
260 274Right-handed alpha
Helix 10
10
A
277 289Right-handed alpha
Helix 11
11
A
299 305Right-handed alpha
Helix 12
12
A
318 329Right-handed alpha
Helix 13
13
A
333 341Right-handed alpha
Helix 14
14
A
346 348Right-handed 310
Helix 15
15
A
349 364Right-handed alpha
Helix 16
16
A
377 381Right-handed 310
Helix 17
17
A
384 391Right-handed alpha
Helix 18
18
B
84 88Right-handed 310
Helix 19
19
B
91 104Right-handed alpha
Helix 20
20
B
118 123Right-handed alpha
Helix 21
21
B
125 142Right-handed alpha
Helix 22
22
B
155 172Right-handed alpha
Helix 23
23
B
205 207Right-handed 310
Helix 24
24
B
230 236Right-handed alpha
Helix 25
25
B
241 245Right-handed 310
Helix 26
26
B
260 274Right-handed alpha
Helix 27
27
B
277 289Right-handed alpha
Helix 28
28
B
299 305Right-handed alpha
Helix 29
29
B
318 329Right-handed alpha
Helix 30
30
B
333 341Right-handed alpha
Helix 31
31
B
346 348Right-handed 310
Helix 32
32
B
349 363Right-handed alpha
Helix 33
33
B
377 381Right-handed 310
Helix 34
34
B
385 391Right-handed alpha
Helix 35
35
C
84 88Right-handed 310
Helix 36
36
C
91 104Right-handed alpha
Helix 37
37
C
118 123Right-handed alpha
Helix 38
38
C
125 142Right-handed alpha
Helix 39
39
C
155 172Right-handed alpha
Helix 40
40
C
205 207Right-handed 310
Helix 41
41
C
230 236Right-handed alpha
Helix 42
42
C
241 245Right-handed 310
Helix 43
43
C
260 274Right-handed alpha
Helix 44
44
C
277 289Right-handed alpha
Helix 45
45
C
299 305Right-handed alpha
Helix 46
46
C
318 329Right-handed alpha
Helix 47
47
C
333 341Right-handed alpha
Helix 48
48
C
346 348Right-handed 310
Helix 49
49
C
349 362Right-handed alpha
Helix 50
50
C
377 381Right-handed 310
Helix 51
51
C
384 391Right-handed alpha
Helix 52
52
D
84 88Right-handed 310
Helix 53
53
D
91 104Right-handed alpha
Helix 54
54
D
118 123Right-handed alpha
Helix 55
55
D
125 142Right-handed alpha
Helix 56
56
D
155 172Right-handed alpha
Helix 57
57
D
205 207Right-handed 310
Helix 58
58
D
230 236Right-handed alpha
Helix 59
59
D
241 245Right-handed 310
Helix 60
60
D
260 275Right-handed alpha
Helix 61
61
D
277 289Right-handed alpha
Helix 62
62
D
299 305Right-handed alpha
Helix 63
63
D
317 329Right-handed alpha
Helix 64
64
D
333 341Right-handed alpha
Helix 65
65
D
346 348Right-handed 310
Helix 66
66
D
349 362Right-handed alpha
Helix 67
67
D
377 381Right-handed 310
Helix 68
68
D
385 391Right-handed alpha
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There are 8 sheets in PDB entry 4BRP. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB, CA, CB, A, DB,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 81first strand
Strand 2
A
54 64anti-parallel
Strand 3
A
43 51anti-parallel
Strand 4
A
111 117parallel
Strand 5
A
146 153parallel
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There are 7 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
209 214first strand
Strand 2
A
217 227anti-parallel
Strand 3
A
191 197anti-parallel
Strand 4
A
182 187anti-parallel
Strand 5
A
293 298parallel
Strand 6
A
372 375parallel
Strand 7
A
315 317anti-parallel
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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
70 81first strand
Strand 2
B
55 64anti-parallel
Strand 3
B
43 50anti-parallel
Strand 4
B
111 117parallel
Strand 5
B
146 153parallel
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There are 7 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
209 214first strand
Strand 2
B
217 227anti-parallel
Strand 3
B
191 197anti-parallel
Strand 4
B
182 187anti-parallel
Strand 5
B
293 298parallel
Strand 6
B
372 375parallel
Strand 7
B
315 317anti-parallel
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There are 5 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
70 81first strand
Strand 2
C
55 64anti-parallel
Strand 3
C
43 50anti-parallel
Strand 4
C
111 117parallel
Strand 5
C
146 153parallel
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There are 7 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
209 214first strand
Strand 2
C
217 227anti-parallel
Strand 3
C
191 197anti-parallel
Strand 4
C
182 187anti-parallel
Strand 5
C
293 298parallel
Strand 6
C
372 375parallel
Strand 7
C
315 317anti-parallel
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There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
70 81first strand
Strand 2
D
55 64anti-parallel
Strand 3
D
43 50anti-parallel
Strand 4
D
111 117parallel
Strand 5
D
146 153parallel
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There are 7 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
209 214first strand
Strand 2
D
217 227anti-parallel
Strand 3
D
191 197anti-parallel
Strand 4
D
182 187anti-parallel
Strand 5
D
293 298parallel
Strand 6
D
373 375parallel
Strand 7
D
315 316anti-parallel
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