Analysis of interatomic Contacts of Structural Units in PDB entry:
4BUG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4BUG entry

There are 2 chains in PDB entry 4BUG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 290PRO 719
B
 THR 291PRO 719
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 4BUG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
463 467Right-handed 310
Helix 2
2
A
474 489Right-handed alpha
Helix 3
3
A
503 520Right-handed alpha
Helix 4
4
A
534 538Right-handed 310
Helix 5
5
A
539 555Right-handed alpha
Helix 6
6
A
583 587Right-handed 310
Helix 7
7
B
463 467Right-handed 310
Helix 8
8
B
474 489Right-handed alpha
Helix 9
9
B
503 520Right-handed alpha
Helix 10
10
B
534 538Right-handed 310
Helix 11
11
B
539 555Right-handed alpha
Helix 12
12
B
583 587Right-handed 310
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There are 10 sheets in PDB entry 4BUG. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, BA, BB, BC, BD, BE,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
334 338first strand
Strand 2
A
291 299anti-parallel
Strand 3
A
588 595parallel
Strand 4
A
383 384anti-parallel
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There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
325 328first strand
Strand 2
A
311 315anti-parallel
Strand 3
A
341 349anti-parallel
Strand 4
A
360 365anti-parallel
Strand 5
A
368 371anti-parallel
Strand 6
A
378 379anti-parallel
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There are 7 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
436 437first strand
Strand 2
A
393 396parallel
Strand 3
A
412 415anti-parallel
Strand 4
A
421 426anti-parallel
Strand 5
A
577 579anti-parallel
Strand 6
A
565 569anti-parallel
Strand 7
A
455 459anti-parallel
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There are 7 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
648 650first strand
Strand 2
A
639 643anti-parallel
Strand 3
A
664 671anti-parallel
Strand 4
A
603 613anti-parallel
Strand 5
A
709 716parallel
Strand 6
A
687 690anti-parallel
Strand 7
A
693 694anti-parallel
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There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
654 659first strand
Strand 2
A
623 630anti-parallel
Strand 3
A
674 680anti-parallel
Strand 4
A
699 705anti-parallel
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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
334 337first strand
Strand 2
B
292 299anti-parallel
Strand 3
B
588 595parallel
Strand 4
B
383 384anti-parallel
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There are 5 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
325 328first strand
Strand 2
B
311 315anti-parallel
Strand 3
B
341 349anti-parallel
Strand 4
B
360 365anti-parallel
Strand 5
B
368 370anti-parallel
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There are 7 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
436 437first strand
Strand 2
B
393 396parallel
Strand 3
B
412 415anti-parallel
Strand 4
B
421 426anti-parallel
Strand 5
B
577 579anti-parallel
Strand 6
B
565 569anti-parallel
Strand 7
B
455 459anti-parallel
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There are 7 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
648 650first strand
Strand 2
B
639 643anti-parallel
Strand 3
B
664 671anti-parallel
Strand 4
B
603 613anti-parallel
Strand 5
B
709 716parallel
Strand 6
B
687 690anti-parallel
Strand 7
B
693 694anti-parallel
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There are 4 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
654 659first strand
Strand 2
B
623 630anti-parallel
Strand 3
B
674 680anti-parallel
Strand 4
B
699 705anti-parallel
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