Analysis of interatomic Contacts of Structural Units in PDB entry:
4BV2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4BV2 entry

There are 4 chains in PDB entry 4BV2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 2ILE 245
B
 MET 3SER 246
E
 HIS 1MET 5
H
 HIS 1MET 5
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 4BV2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 13Right-handed alpha
Helix 2
2
A
22 29Right-handed 310
Helix 3
3
A
49 56Right-handed alpha
Helix 4
4
A
56 68Right-handed alpha
Helix 5
5
A
69 74Right-handed 310
Helix 6
6
A
77 89Right-handed alpha
Helix 7
7
A
102 107Right-handed alpha
Helix 8
8
A
133 140Right-handed alpha
Helix 9
9
A
167 181Right-handed alpha
Helix 10
10
A
195 197Right-handed 310
Helix 11
11
A
198 207Right-handed alpha
Helix 12
12
A
220 224Right-handed 310
Helix 13
13
A
231 244Right-handed alpha
Helix 14
14
B
3 13Right-handed alpha
Helix 15
15
B
22 29Right-handed 310
Helix 16
16
B
49 56Right-handed alpha
Helix 17
17
B
56 68Right-handed alpha
Helix 18
18
B
69 74Right-handed 310
Helix 19
19
B
77 89Right-handed alpha
Helix 20
20
B
102 107Right-handed alpha
Helix 21
21
B
133 140Right-handed alpha
Helix 22
22
B
167 181Right-handed alpha
Helix 23
23
B
195 197Right-handed 310
Helix 24
24
B
198 207Right-handed alpha
Helix 25
25
B
220 224Right-handed 310
Helix 26
26
B
231 244Right-handed alpha
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There are 4 sheets in PDB entry 4BV2. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
112 114first strand
Strand 2
A
94 97parallel
Strand 3
A
16 20parallel
Strand 4
A
183 187parallel
Strand 5
A
209 213parallel
Strand 6
A
226 228parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 132first strand
Strand 2
A
117 124anti-parallel
Strand 3
A
155 159anti-parallel
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There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
112 114first strand
Strand 2
B
94 97parallel
Strand 3
B
16 20parallel
Strand 4
B
183 187parallel
Strand 5
B
209 213parallel
Strand 6
B
226 228parallel
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There are 3 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
130 132first strand
Strand 2
B
117 124anti-parallel
Strand 3
B
155 159anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il