Analysis of interatomic Contacts of Structural Units in PDB entry:
4BV4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4BV4 entry

There are 3 chains in PDB entry 4BV4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
L
 ARG 7THR 105
M
 GLY 0THR 105
R
 SER 28THR 467
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 4BV4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
L
56 60Right-handed 310
Helix 2
2
R
30 36Right-handed alpha
Helix 3
3
R
37 41Right-handed 310
Helix 4
4
R
83 90Right-handed 310
Helix 5
5
R
115 122Right-handed alpha
Helix 6
6
R
142 147Right-handed 310
Helix 7
7
R
189 194Right-handed 310
Helix 8
8
R
215 220Right-handed 310
Helix 9
9
R
237 242Right-handed 310
Helix 10
10
R
433 443Right-handed alpha
Helix 11
11
R
460 463Right-handed 310
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There are 5 sheets in PDB entry 4BV4. Click on sheet of interest to get list of strands forming it: LA, LB, MA, RA, RB,

There are 4 strands in LA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
12 17first strand
Strand 2
L
42 47anti-parallel
Strand 3
M
65 75anti-parallel
Strand 4
M
94 104anti-parallel
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There are 3 strands in LB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
65 75first strand
Strand 2
L
93 104anti-parallel
Strand 3
M
6 8anti-parallel
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There are 2 strands in MA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
12 17first strand
Strand 2
M
42 47anti-parallel
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There are 19 strands in RA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
R
44 48first strand
Strand 2
R
51 56anti-parallel
Strand 3
R
65 70anti-parallel
Strand 4
R
74 79anti-parallel
Strand 5
R
101 105parallel
Strand 6
R
129 133parallel
Strand 7
R
154 158parallel
Strand 8
R
178 182parallel
Strand 9
R
201 203parallel
Strand 10
R
225 227parallel
Strand 11
R
249 251parallel
Strand 12
R
273 275parallel
Strand 13
R
297 300parallel
Strand 14
R
323 326parallel
Strand 15
R
346 348parallel
Strand 16
R
370 372parallel
Strand 17
R
394 396parallel
Strand 18
R
418 420parallel
Strand 19
R
447 448parallel
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There are 2 strands in RB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
R
97 98first strand
Strand 2
R
124 125parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il