Analysis of interatomic Contacts of Structural Units in PDB entry:
4BV8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4BV8 entry

There are 2 chains in PDB entry 4BV8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 3GLY 312
B
 ARG 3SER 311
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 4BV8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 16Right-handed alpha
Helix 2
2
A
19 36Right-handed alpha
Helix 3
3
A
37 40Right-handed 310
Helix 4
4
A
53 55Right-handed 310
Helix 5
5
A
111 131Right-handed alpha
Helix 6
6
A
144 158Right-handed alpha
Helix 7
7
A
169 180Right-handed alpha
Helix 8
8
A
189 195Right-handed alpha
Helix 9
9
A
212 216Right-handed 310
Helix 10
10
A
236 243Right-handed alpha
Helix 11
11
A
249 257Right-handed alpha
Helix 12
12
A
257 264Right-handed alpha
Helix 13
13
A
271 276Right-handed alpha
Helix 14
14
A
294 311Right-handed alpha
Helix 15
15
B
9 16Right-handed alpha
Helix 16
16
B
19 36Right-handed alpha
Helix 17
17
B
37 40Right-handed 310
Helix 18
18
B
53 56Right-handed 310
Helix 19
19
B
111 131Right-handed alpha
Helix 20
20
B
144 158Right-handed alpha
Helix 21
21
B
169 180Right-handed alpha
Helix 22
22
B
189 195Right-handed alpha
Helix 23
23
B
212 216Right-handed 310
Helix 24
24
B
236 243Right-handed alpha
Helix 25
25
B
249 257Right-handed alpha
Helix 26
26
B
257 262Right-handed alpha
Helix 27
27
B
271 276Right-handed alpha
Helix 28
28
B
294 311Right-handed alpha
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There are 8 sheets in PDB entry 4BV8. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA, BB, BC, BD,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 8first strand
Strand 2
A
105 110parallel
Strand 3
A
91 98anti-parallel
Strand 4
A
71 80anti-parallel
Strand 5
A
57 66anti-parallel
Strand 6
A
48 52anti-parallel
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There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 8first strand
Strand 2
A
105 110parallel
Strand 3
A
91 98anti-parallel
Strand 4
A
71 80anti-parallel
Strand 5
A
57 66anti-parallel
Strand 6
A
42 43anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 52first strand
Strand 2
A
57 66anti-parallel
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There are 8 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 186first strand
Strand 2
A
162 166parallel
Strand 3
A
137 141parallel
Strand 4
A
199 202parallel
Strand 5
A
221 224parallel
Strand 6
A
287 290parallel
Strand 7
A
244 247parallel
Strand 8
A
269 270parallel
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There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 8first strand
Strand 2
B
105 110parallel
Strand 3
B
91 98anti-parallel
Strand 4
B
71 79anti-parallel
Strand 5
B
57 66anti-parallel
Strand 6
B
48 52anti-parallel
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There are 6 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 8first strand
Strand 2
B
105 110parallel
Strand 3
B
91 98anti-parallel
Strand 4
B
71 79anti-parallel
Strand 5
B
57 66anti-parallel
Strand 6
B
42 43anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 52first strand
Strand 2
B
57 66anti-parallel
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There are 8 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
184 186first strand
Strand 2
B
162 166parallel
Strand 3
B
137 141parallel
Strand 4
B
199 202parallel
Strand 5
B
221 224parallel
Strand 6
B
287 290parallel
Strand 7
B
244 247parallel
Strand 8
B
269 270parallel
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