Analysis of interatomic Contacts of Structural Units in PDB entry:
4BVT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4BVT entry

There are 2 chains in PDB entry 4BVT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 0ALA 363
B
 HIS 0ALA 363
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 26 helices in PDB entry 4BVT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 26Right-handed alpha
Helix 2
2
A
50 68Right-handed alpha
Helix 3
3
A
70 78Right-handed alpha
Helix 4
4
A
124 128Right-handed 310
Helix 5
5
A
130 149Right-handed alpha
Helix 6
6
A
152 154Right-handed 310
Helix 7
7
A
167 177Right-handed alpha
Helix 8
8
A
185 205Right-handed alpha
Helix 9
9
A
209 213Right-handed 310
Helix 10
10
A
214 218Right-handed 310
Helix 11
11
A
267 278Right-handed alpha
Helix 12
12
A
285 287Right-handed 310
Helix 13
13
A
318 336Right-handed alpha
Helix 14
14
B
17 26Right-handed alpha
Helix 15
15
B
50 68Right-handed alpha
Helix 16
16
B
70 78Right-handed alpha
Helix 17
17
B
124 128Right-handed 310
Helix 18
18
B
130 149Right-handed alpha
Helix 19
19
B
152 154Right-handed 310
Helix 20
20
B
167 177Right-handed alpha
Helix 21
21
B
185 205Right-handed alpha
Helix 22
22
B
209 213Right-handed 310
Helix 23
23
B
214 218Right-handed 310
Helix 24
24
B
267 278Right-handed alpha
Helix 25
25
B
285 287Right-handed 310
Helix 26
26
B
318 336Right-handed alpha
Back to top of page

There are 8 sheets in PDB entry 4BVT. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA, BB, BC, BD,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 10first strand
Strand 2
A
93 101anti-parallel
Strand 3
A
34 41anti-parallel
Strand 4
A
79 84parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
112 119first strand
Strand 2
A
241 248anti-parallel
Strand 3
A
156 163anti-parallel
Strand 4
A
229 233parallel
Back to list of sheets
Back to top of page

There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
255 262first strand
Strand 2
A
355 362anti-parallel
Strand 3
A
289 296anti-parallel
Strand 4
A
341 344parallel
Back to list of sheets
Back to top of page

There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
303 304first strand
Strand 2
A
307 308anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 10first strand
Strand 2
B
93 101anti-parallel
Strand 3
B
34 41anti-parallel
Strand 4
B
79 84parallel
Back to list of sheets
Back to top of page

There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
112 119first strand
Strand 2
B
241 248anti-parallel
Strand 3
B
156 163anti-parallel
Strand 4
B
229 233parallel
Back to list of sheets
Back to top of page

There are 4 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
255 262first strand
Strand 2
B
355 362anti-parallel
Strand 3
B
289 296anti-parallel
Strand 4
B
341 344parallel
Back to list of sheets
Back to top of page

There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
303 304first strand
Strand 2
B
307 308anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il