Analysis of interatomic Contacts of Structural Units in PDB entry:
4BWK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4BWK entry

There are 2 chains in PDB entry 4BWK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 235GLU 646
B
 PRO 235GLU 646
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 25 helices in PDB entry 4BWK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
236 250Right-handed alpha
Helix 2
2
A
312 322Right-handed alpha
Helix 3
3
A
360 364Right-handed alpha
Helix 4
4
A
382 400Right-handed alpha
Helix 5
5
A
429 432Right-handed alpha
Helix 6
6
A
442 462Right-handed alpha
Helix 7
7
A
479 482Right-handed alpha
Helix 8
8
A
485 495Right-handed alpha
Helix 9
9
A
506 513Right-handed alpha
Helix 10
10
A
515 554Right-handed alpha
Helix 11
11
A
572 583Right-handed alpha
Helix 12
12
A
596 607Right-handed alpha
Helix 13
13
A
629 645Right-handed alpha
Helix 14
14
B
236 250Right-handed alpha
Helix 15
15
B
313 322Right-handed alpha
Helix 16
16
B
360 364Right-handed alpha
Helix 17
17
B
382 401Right-handed alpha
Helix 18
18
B
428 432Right-handed alpha
Helix 19
19
B
442 461Right-handed alpha
Helix 20
20
B
485 495Right-handed alpha
Helix 21
21
B
506 513Right-handed alpha
Helix 22
22
B
515 554Right-handed alpha
Helix 23
23
B
572 583Right-handed alpha
Helix 24
24
B
596 607Right-handed alpha
Helix 25
25
B
629 643Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 4BWK. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
264 269first strand
Strand 2
A
285 292anti-parallel
Strand 3
A
298 305anti-parallel
Strand 4
A
346 352anti-parallel
Strand 5
A
333 339anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
358 359first strand
Strand 2
A
414 417anti-parallel
Strand 3
A
420 423anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
613 617first strand
Strand 2
A
624 628anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
264 269first strand
Strand 2
B
285 292anti-parallel
Strand 3
B
298 305anti-parallel
Strand 4
B
346 352anti-parallel
Strand 5
B
333 339anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
358 359first strand
Strand 2
B
414 417anti-parallel
Strand 3
B
420 423anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
613 617first strand
Strand 2
B
624 628anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il