Analysis of interatomic Contacts of Structural Units in PDB entry:
4BWP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4BWP entry

There are 2 chains in PDB entry 4BWP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 379SER 787
B
 PRO 379SER 787
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 4BWP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
433 444Right-handed alpha
Helix 2
2
A
480 485Right-handed alpha
Helix 3
3
A
522 541Right-handed alpha
Helix 4
4
A
568 572Right-handed alpha
Helix 5
5
A
585 605Right-handed alpha
Helix 6
6
A
616 626Right-handed alpha
Helix 7
7
A
629 639Right-handed alpha
Helix 8
8
A
651 654Right-handed alpha
Helix 9
9
A
657 695Right-handed alpha
Helix 10
10
A
711 724Right-handed alpha
Helix 11
11
A
737 749Right-handed alpha
Helix 12
12
A
770 786Right-handed alpha
Helix 13
13
B
434 444Right-handed alpha
Helix 14
14
B
480 484Right-handed alpha
Helix 15
15
B
522 541Right-handed alpha
Helix 16
16
B
566 573Right-handed alpha
Helix 17
17
B
581 605Right-handed alpha
Helix 18
18
B
616 626Right-handed alpha
Helix 19
19
B
629 639Right-handed alpha
Helix 20
20
B
651 654Right-handed alpha
Helix 21
21
B
657 697Right-handed alpha
Helix 22
22
B
712 724Right-handed alpha
Helix 23
23
B
737 749Right-handed alpha
Helix 24
24
B
770 786Right-handed alpha
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There are 7 sheets in PDB entry 4BWP. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA, BB, BC,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
385 390first strand
Strand 2
A
406 413anti-parallel
Strand 3
A
419 426anti-parallel
Strand 4
A
466 472anti-parallel
Strand 5
A
453 459anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
398 399first strand
Strand 2
A
403 404anti-parallel
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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
478 479first strand
Strand 2
A
554 557anti-parallel
Strand 3
A
560 563anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
754 758first strand
Strand 2
A
765 769anti-parallel
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There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
381 382first strand
Strand 2
B
385 390anti-parallel
Strand 3
B
406 413anti-parallel
Strand 4
B
419 426anti-parallel
Strand 5
B
466 472anti-parallel
Strand 6
B
453 459anti-parallel
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There are 3 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
478 479first strand
Strand 2
B
554 557anti-parallel
Strand 3
B
560 563anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
754 758first strand
Strand 2
B
765 769anti-parallel
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