Analysis of interatomic Contacts of Structural Units in PDB entry:
4BZY

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4BZY entry

There are 3 chains in PDB entry 4BZY (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 43	LEU 700
B	ASP 44	ASP 699
C	GLN 46	ASP 699

There are 78 helices in PDB entry 4BZY. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	44	63	Right-handed alpha
Helix 2	2	A	65	70	Right-handed alpha
Helix 3	3	A	71	75	Right-handed 310
Helix 4	4	A	104	106	Right-handed 310
Helix 5	5	A	215	223	Right-handed alpha
Helix 6	6	A	223	231	Right-handed alpha
Helix 7	7	A	245	249	Right-handed 310
Helix 8	8	A	261	264	Right-handed 310
Helix 9	9	A	265	279	Right-handed alpha
Helix 10	10	A	314	316	Right-handed 310
Helix 11	11	A	331	348	Right-handed alpha
Helix 12	12	A	358	364	Right-handed alpha
Helix 13	13	A	386	404	Right-handed alpha
Helix 14	14	A	423	427	Right-handed 310
Helix 15	15	A	437	450	Right-handed alpha
Helix 16	16	A	451	455	Right-handed 310
Helix 17	17	A	456	466	Right-handed alpha
Helix 18	18	A	480	483	Right-handed 310
Helix 19	19	A	489	496	Right-handed alpha
Helix 20	20	A	497	501	Right-handed 310
Helix 21	21	A	510	531	Right-handed alpha
Helix 22	22	A	540	544	Right-handed 310
Helix 23	23	A	553	557	Right-handed 310
Helix 24	24	A	566	571	Right-handed 310
Helix 25	25	A	576	595	Right-handed alpha
Helix 26	26	A	654	658	Right-handed 310
Helix 27	27	B	44	63	Right-handed alpha
Helix 28	28	B	65	70	Right-handed alpha
Helix 29	29	B	71	75	Right-handed 310
Helix 30	30	B	104	106	Right-handed 310
Helix 31	31	B	215	223	Right-handed alpha
Helix 32	32	B	223	231	Right-handed alpha
Helix 33	33	B	245	249	Right-handed 310
Helix 34	34	B	261	264	Right-handed 310
Helix 35	35	B	265	279	Right-handed alpha
Helix 36	36	B	314	316	Right-handed 310
Helix 37	37	B	331	348	Right-handed alpha
Helix 38	38	B	358	365	Right-handed alpha
Helix 39	39	B	386	404	Right-handed alpha
Helix 40	40	B	423	427	Right-handed 310
Helix 41	41	B	437	450	Right-handed alpha
Helix 42	42	B	451	455	Right-handed 310
Helix 43	43	B	456	466	Right-handed alpha
Helix 44	44	B	479	483	Right-handed 310
Helix 45	45	B	489	496	Right-handed alpha
Helix 46	46	B	497	501	Right-handed 310
Helix 47	47	B	510	531	Right-handed alpha
Helix 48	48	B	540	544	Right-handed 310
Helix 49	49	B	553	557	Right-handed 310
Helix 50	50	B	566	571	Right-handed 310
Helix 51	51	B	576	595	Right-handed alpha
Helix 52	52	B	654	658	Right-handed 310
Helix 53	53	C	46	63	Right-handed alpha
Helix 54	54	C	65	70	Right-handed alpha
Helix 55	55	C	71	75	Right-handed 310
Helix 56	56	C	104	106	Right-handed 310
Helix 57	57	C	215	223	Right-handed alpha
Helix 58	58	C	223	231	Right-handed alpha
Helix 59	59	C	245	249	Right-handed 310
Helix 60	60	C	261	264	Right-handed 310
Helix 61	61	C	265	279	Right-handed alpha
Helix 62	62	C	314	316	Right-handed 310
Helix 63	63	C	331	348	Right-handed alpha
Helix 64	64	C	358	364	Right-handed alpha
Helix 65	65	C	386	404	Right-handed alpha
Helix 66	66	C	423	427	Right-handed 310
Helix 67	67	C	437	450	Right-handed alpha
Helix 68	68	C	451	455	Right-handed 310
Helix 69	69	C	456	466	Right-handed alpha
Helix 70	70	C	479	483	Right-handed 310
Helix 71	71	C	489	496	Right-handed alpha
Helix 72	72	C	497	501	Right-handed 310
Helix 73	73	C	510	531	Right-handed alpha
Helix 74	74	C	540	544	Right-handed 310
Helix 75	75	C	553	557	Right-handed 310
Helix 76	76	C	566	571	Right-handed 310
Helix 77	77	C	576	595	Right-handed alpha
Helix 78	78	C	654	658	Right-handed 310

There are 29 sheets in PDB entry 4BZY. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, BA, BB, BC, BD, BE, BF, BG, BH, BI, BJ, CA, CB, CC, CD, CE, CF, CG, CH, CI,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	77	80	first strand
Strand 2	A	86	91	anti-parallel
Strand 3	A	121	126	anti-parallel
Strand 4	A	115	116	anti-parallel

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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	97	102	first strand
Strand 2	A	141	147	anti-parallel

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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	153	156	first strand
Strand 2	A	141	147	parallel

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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	164	165	first strand
Strand 2	A	174	176	anti-parallel
Strand 3	A	141	147	anti-parallel
Strand 4	A	153	156	parallel

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There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	164	165	first strand
Strand 2	A	174	176	anti-parallel
Strand 3	A	141	147	anti-parallel
Strand 4	A	97	102	anti-parallel

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There are 8 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	473	474	first strand
Strand 2	A	433	435	parallel
Strand 3	A	408	411	parallel
Strand 4	A	353	357	parallel
Strand 5	A	282	288	parallel
Strand 6	A	234	238	parallel
Strand 7	A	197	203	parallel
Strand 8	A	534	538	parallel

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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	241	242	first strand
Strand 2	A	255	259	anti-parallel

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There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	318	319	first strand
Strand 2	A	324	325	anti-parallel

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There are 6 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	603	608	first strand
Strand 2	A	613	618	anti-parallel
Strand 3	A	621	626	anti-parallel
Strand 4	A	691	698	anti-parallel
Strand 5	A	644	651	anti-parallel
Strand 6	A	669	671	anti-parallel

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There are 2 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	633	640	first strand
Strand 2	A	681	687	anti-parallel

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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	77	80	first strand
Strand 2	B	86	91	anti-parallel
Strand 3	B	121	126	anti-parallel
Strand 4	B	115	116	anti-parallel

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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	97	102	first strand
Strand 2	B	141	147	anti-parallel

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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	153	156	first strand
Strand 2	B	141	147	parallel

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There are 4 strands in BD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	164	165	first strand
Strand 2	B	174	176	anti-parallel
Strand 3	B	141	147	anti-parallel
Strand 4	B	153	156	parallel

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There are 4 strands in BE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	164	165	first strand
Strand 2	B	174	176	anti-parallel
Strand 3	B	141	147	anti-parallel
Strand 4	B	97	102	anti-parallel

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There are 9 strands in BF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	197	203	first strand
Strand 2	B	534	538	parallel
Strand 3	B	472	475	parallel
Strand 4	B	433	435	parallel
Strand 5	B	408	411	parallel
Strand 6	B	353	357	parallel
Strand 7	B	282	288	parallel
Strand 8	B	234	238	parallel
Strand 9	B	197	203	parallel

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There are 2 strands in BG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	241	242	first strand
Strand 2	B	255	259	anti-parallel

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There are 2 strands in BH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	318	319	first strand
Strand 2	B	324	325	anti-parallel

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There are 6 strands in BI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	603	608	first strand
Strand 2	B	613	618	anti-parallel
Strand 3	B	621	626	anti-parallel
Strand 4	B	691	697	anti-parallel
Strand 5	B	644	651	anti-parallel
Strand 6	B	669	671	anti-parallel

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There are 2 strands in BJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	633	640	first strand
Strand 2	B	681	687	anti-parallel

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There are 4 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	77	80	first strand
Strand 2	C	86	91	anti-parallel
Strand 3	C	121	126	anti-parallel
Strand 4	C	115	116	anti-parallel

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There are 2 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	97	102	first strand
Strand 2	C	141	147	anti-parallel

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There are 2 strands in CC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	153	156	first strand
Strand 2	C	141	147	parallel

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There are 4 strands in CD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	164	165	first strand
Strand 2	C	174	176	anti-parallel
Strand 3	C	141	147	anti-parallel
Strand 4	C	153	156	parallel

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There are 4 strands in CE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	164	165	first strand
Strand 2	C	174	176	anti-parallel
Strand 3	C	141	147	anti-parallel
Strand 4	C	97	102	anti-parallel

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There are 9 strands in CF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	197	203	first strand
Strand 2	C	534	538	parallel
Strand 3	C	472	475	parallel
Strand 4	C	433	435	parallel
Strand 5	C	408	411	parallel
Strand 6	C	353	357	parallel
Strand 7	C	282	288	parallel
Strand 8	C	234	238	parallel
Strand 9	C	197	203	parallel

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There are 2 strands in CG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	241	242	first strand
Strand 2	C	255	259	anti-parallel

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There are 2 strands in CH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	318	319	first strand
Strand 2	C	324	325	anti-parallel

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There are 8 strands in CI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	603	608	first strand
Strand 2	C	613	618	anti-parallel
Strand 3	C	621	626	anti-parallel
Strand 4	C	691	697	anti-parallel
Strand 5	C	644	651	anti-parallel
Strand 6	C	669	676	anti-parallel
Strand 7	C	679	687	anti-parallel
Strand 8	C	633	640	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4BZY

Analysis of interatomic Contacts of Structural Units in PDB entry:
4BZY