Analysis of interatomic Contacts of Structural Units in PDB entry:
4C01


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4C01 entry

There are 5 chains in PDB entry 4C01 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1TYR 276
B
 MET 1TYR 276
C
 MET 1TYR 276
D
 MET 1TYR 276
E
 MET 1TRP 180
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 69 helices in PDB entry 4C01. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
49 52Right-handed 310
Helix 2
2
A
53 63Right-handed alpha
Helix 3
3
A
83 104Right-handed alpha
Helix 4
4
A
117 129Right-handed alpha
Helix 5
5
A
131 138Right-handed alpha
Helix 6
6
A
166 174Right-handed alpha
Helix 7
7
A
176 180Right-handed 310
Helix 8
8
A
182 185Right-handed 310
Helix 9
9
A
206 218Right-handed alpha
Helix 10
10
A
247 251Right-handed 310
Helix 11
11
A
254 256Right-handed 310
Helix 12
12
A
257 269Right-handed alpha
Helix 13
13
B
49 52Right-handed 310
Helix 14
14
B
53 62Right-handed alpha
Helix 15
15
B
83 104Right-handed alpha
Helix 16
16
B
117 129Right-handed alpha
Helix 17
17
B
131 138Right-handed alpha
Helix 18
18
B
166 174Right-handed alpha
Helix 19
19
B
176 180Right-handed 310
Helix 20
20
B
206 218Right-handed alpha
Helix 21
21
B
247 251Right-handed 310
Helix 22
22
B
254 256Right-handed 310
Helix 23
23
B
257 269Right-handed alpha
Helix 24
24
C
49 52Right-handed 310
Helix 25
25
C
53 62Right-handed alpha
Helix 26
26
C
83 104Right-handed alpha
Helix 27
27
C
117 129Right-handed alpha
Helix 28
28
C
131 138Right-handed alpha
Helix 29
29
C
166 174Right-handed alpha
Helix 30
30
C
176 180Right-handed 310
Helix 31
31
C
182 186Right-handed 310
Helix 32
32
C
206 219Right-handed alpha
Helix 33
33
C
247 251Right-handed 310
Helix 34
34
C
254 256Right-handed 310
Helix 35
35
C
257 269Right-handed alpha
Helix 36
36
D
49 52Right-handed 310
Helix 37
37
D
53 62Right-handed alpha
Helix 38
38
D
83 104Right-handed alpha
Helix 39
39
D
116 129Right-handed alpha
Helix 40
40
D
131 138Right-handed alpha
Helix 41
41
D
166 174Right-handed alpha
Helix 42
42
D
176 180Right-handed 310
Helix 43
43
D
206 218Right-handed alpha
Helix 44
44
D
247 251Right-handed 310
Helix 45
45
D
254 256Right-handed 310
Helix 46
46
D
257 269Right-handed alpha
Helix 47
47
E
49 52Right-handed 310
Helix 48
48
E
53 62Right-handed alpha
Helix 49
49
E
83 104Right-handed alpha
Helix 50
50
E
117 129Right-handed alpha
Helix 51
51
E
131 138Right-handed alpha
Helix 52
52
E
166 174Right-handed alpha
Helix 53
53
E
176 180Right-handed 310
Helix 54
54
E
206 218Right-handed alpha
Helix 55
55
E
247 251Right-handed 310
Helix 56
56
E
254 256Right-handed 310
Helix 57
57
E
257 269Right-handed alpha
Helix 58
58
F
49 52Right-handed 310
Helix 59
59
F
53 63Right-handed alpha
Helix 60
60
F
83 104Right-handed alpha
Helix 61
61
F
117 129Right-handed alpha
Helix 62
62
F
131 139Right-handed alpha
Helix 63
63
F
166 174Right-handed alpha
Helix 64
64
F
176 180Right-handed 310
Helix 65
65
F
182 186Right-handed 310
Helix 66
66
F
206 218Right-handed alpha
Helix 67
67
F
247 251Right-handed 310
Helix 68
68
F
254 256Right-handed 310
Helix 69
69
F
257 269Right-handed alpha
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There are 6 sheets in PDB entry 4C01. Click on sheet of interest to get list of strands forming it: AA, BA, CA, A, EA, FA,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 8first strand
Strand 2
A
15 21anti-parallel
Strand 3
A
66 70anti-parallel
Strand 4
A
34 40parallel
Strand 5
A
105 115parallel
Strand 6
A
149 153parallel
Strand 7
A
193 198parallel
Strand 8
A
223 228parallel
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There are 8 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 8first strand
Strand 2
B
15 21anti-parallel
Strand 3
B
66 70anti-parallel
Strand 4
B
34 40parallel
Strand 5
B
105 115parallel
Strand 6
B
149 153parallel
Strand 7
B
193 198parallel
Strand 8
B
223 228parallel
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There are 8 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
2 8first strand
Strand 2
C
15 21anti-parallel
Strand 3
C
66 70anti-parallel
Strand 4
C
34 40parallel
Strand 5
C
105 115parallel
Strand 6
C
149 153parallel
Strand 7
C
193 198parallel
Strand 8
C
223 228parallel
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There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
2 8first strand
Strand 2
D
15 21anti-parallel
Strand 3
D
66 70anti-parallel
Strand 4
D
34 40parallel
Strand 5
D
105 115parallel
Strand 6
D
149 153parallel
Strand 7
D
193 198parallel
Strand 8
D
223 228parallel
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There are 8 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
2 8first strand
Strand 2
E
15 21anti-parallel
Strand 3
E
66 70anti-parallel
Strand 4
E
34 40parallel
Strand 5
E
105 115parallel
Strand 6
E
149 153parallel
Strand 7
E
193 198parallel
Strand 8
E
223 228parallel
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There are 8 strands in FA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
2 8first strand
Strand 2
F
15 21anti-parallel
Strand 3
F
66 70anti-parallel
Strand 4
F
34 40parallel
Strand 5
F
105 115parallel
Strand 6
F
149 153parallel
Strand 7
F
193 198parallel
Strand 8
F
223 228parallel
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