Analysis of interatomic Contacts of Structural Units in PDB entry:
4C07


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4C07 entry

There is 1 chain in PDB entry 4C07 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 49GLU 377
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 4C07. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
53 65Right-handed alpha
Helix 2
2
A
66 79Right-handed alpha
Helix 3
3
A
80 85Right-handed alpha
Helix 4
4
A
97 106Right-handed alpha
Helix 5
5
A
119 130Right-handed alpha
Helix 6
6
A
169 180Right-handed alpha
Helix 7
7
A
201 210Right-handed alpha
Helix 8
8
A
213 219Right-handed alpha
Helix 9
9
A
224 235Right-handed alpha
Helix 10
10
A
245 248Right-handed 310
Helix 11
11
A
265 273Right-handed alpha
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There are 5 sheets in PDB entry 4C07. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
136 140first strand
Strand 2
A
110 115parallel
Strand 3
A
88 92parallel
Strand 4
A
152 156parallel
Strand 5
A
181 188parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
240 242first strand
Strand 2
A
323 334anti-parallel
Strand 3
A
286 299anti-parallel
Strand 4
A
308 311anti-parallel
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There are 5 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
240 242first strand
Strand 2
A
323 334anti-parallel
Strand 3
A
286 299anti-parallel
Strand 4
A
191 199anti-parallel
Strand 5
A
254 260anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
308 311first strand
Strand 2
A
286 299anti-parallel
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There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
274 281first strand
Strand 2
A
339 348anti-parallel
Strand 3
A
356 364anti-parallel
Strand 4
A
370 375anti-parallel
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