Analysis of interatomic Contacts of Structural Units in PDB entry:
4C29


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4C29 entry

There are 2 chains in PDB entry 4C29 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 1266PRO 1466
B
 PRO 1266PRO 1466
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 4C29. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1289 1306Right-handed alpha
Helix 2
2
A
1336 1346Right-handed alpha
Helix 3
3
A
1356 1367Right-handed alpha
Helix 4
4
A
1390 1395Right-handed 310
Helix 5
5
A
1396 1407Right-handed alpha
Helix 6
6
A
1421 1430Right-handed alpha
Helix 7
7
A
1431 1436Right-handed 310
Helix 8
8
A
1442 1444Right-handed 310
Helix 9
9
A
1445 1461Right-handed alpha
Helix 10
10
B
1289 1306Right-handed alpha
Helix 11
11
B
1336 1346Right-handed alpha
Helix 12
12
B
1356 1367Right-handed alpha
Helix 13
13
B
1390 1394Right-handed 310
Helix 14
14
B
1396 1407Right-handed alpha
Helix 15
15
B
1421 1430Right-handed alpha
Helix 16
16
B
1431 1436Right-handed 310
Helix 17
17
B
1442 1446Right-handed 310
Helix 18
18
B
1449 1461Right-handed alpha
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There are 2 sheets in PDB entry 4C29. Click on sheet of interest to get list of strands forming it: AA, BA,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1325 1329first strand
Strand 2
A
1314 1321anti-parallel
Strand 3
A
1276 1283parallel
Strand 4
A
1378 1385parallel
Strand 5
A
1409 1416parallel
Strand 6
A
1438 1440parallel
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There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1325 1329first strand
Strand 2
B
1314 1321anti-parallel
Strand 3
B
1276 1283parallel
Strand 4
B
1378 1385parallel
Strand 5
B
1409 1416parallel
Strand 6
B
1438 1440parallel
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