Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 4C53 entry
There are 3 chains in PDB entry 4C53
(CSU analysis of residue contacts immediately below table)
| Chain ID |
Initial residue | Terminal residue |
A
|
SER 293 | LYS 403 |
B
|
SER 293 | ASP 407 |
C
|
PHE 295 | GLN 406 |
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There are 10
helices in PDB entry 4C53. Click on helix of interest for
CSU analysis.
Helix number
| Helix ID | Chain ID |
Initial residue | Terminal residue |
Helix class |
| Helix 1 |
1 | A
| 293 |
340 | Right-handed alpha |
| Helix 2 |
2 | A
| 341 |
345 | Right-handed 310 |
| Helix 3 |
3 | A
| 387 |
403 | Right-handed alpha |
| Helix 4 |
4 | B
| 294 |
341 | Right-handed alpha |
| Helix 5 |
5 | B
| 342 |
345 | Right-handed 310 |
| Helix 6 |
6 | B
| 352 |
361 | Right-handed alpha |
| Helix 7 |
7 | B
| 387 |
403 | Right-handed alpha |
| Helix 8 |
8 | C
| 295 |
341 | Right-handed alpha |
| Helix 9 |
9 | C
| 342 |
345 | Right-handed 310 |
| Helix 10 |
10 | C
| 387 |
403 | Right-handed alpha |
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There are no sheets in PDB entry
4C53
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il