Analysis of interatomic Contacts of Structural Units in PDB entry:
4C5D


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4C5D entry

There are 2 chains in PDB entry 4C5D (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -5GLY 196
B
 LEU -3ASN 198
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 4C5D. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 19Right-handed alpha
Helix 2
2
A
25 101Right-handed alpha
Helix 3
3
A
102 105Right-handed 310
Helix 4
4
A
107 112Right-handed alpha
Helix 5
5
A
119 131Right-handed alpha
Helix 6
6
A
136 157Right-handed alpha
Helix 7
7
A
161 178Right-handed alpha
Helix 8
8
A
178 185Right-handed alpha
Helix 9
9
A
187 195Right-handed alpha
Helix 10
10
B
-1 19Right-handed alpha
Helix 11
11
B
25 102Right-handed alpha
Helix 12
12
B
103 106Right-handed 310
Helix 13
13
B
108 113Right-handed alpha
Helix 14
14
B
119 131Right-handed alpha
Helix 15
15
B
136 157Right-handed alpha
Helix 16
16
B
160 177Right-handed alpha
Helix 17
17
B
177 185Right-handed alpha
Helix 18
18
B
186 196Right-handed alpha
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There are no sheets in PDB entry 4C5D
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il