Analysis of interatomic Contacts of Structural Units in PDB entry:
4C5F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4C5F entry

There are 2 chains in PDB entry 4C5F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TRP 30ARG 359
B
 TRP 30ARG 359
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 4C5F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
32 53Right-handed alpha
Helix 2
2
A
54 57Right-handed 310
Helix 3
3
A
70 72Right-handed 310
Helix 4
4
A
94 109Right-handed alpha
Helix 5
5
A
112 116Right-handed 310
Helix 6
6
A
147 162Right-handed alpha
Helix 7
7
A
183 191Right-handed alpha
Helix 8
8
A
192 204Right-handed alpha
Helix 9
9
A
206 219Right-handed alpha
Helix 10
10
A
240 249Right-handed alpha
Helix 11
11
A
256 261Right-handed alpha
Helix 12
12
A
262 280Right-handed alpha
Helix 13
13
A
287 302Right-handed alpha
Helix 14
14
A
302 308Right-handed alpha
Helix 15
15
A
313 322Right-handed alpha
Helix 16
16
A
325 337Right-handed alpha
Helix 17
17
A
339 355Right-handed alpha
Helix 18
18
B
32 53Right-handed alpha
Helix 19
19
B
54 57Right-handed 310
Helix 20
20
B
94 109Right-handed alpha
Helix 21
21
B
112 116Right-handed 310
Helix 22
22
B
147 162Right-handed alpha
Helix 23
23
B
183 190Right-handed alpha
Helix 24
24
B
192 204Right-handed alpha
Helix 25
25
B
206 219Right-handed alpha
Helix 26
26
B
240 249Right-handed alpha
Helix 27
27
B
256 262Right-handed alpha
Helix 28
28
B
262 280Right-handed alpha
Helix 29
29
B
287 302Right-handed alpha
Helix 30
30
B
302 308Right-handed alpha
Helix 31
31
B
313 322Right-handed alpha
Helix 32
32
B
325 337Right-handed alpha
Helix 33
33
B
339 355Right-handed alpha
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There are 4 sheets in PDB entry 4C5F. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 69first strand
Strand 2
A
74 79anti-parallel
Strand 3
A
84 89anti-parallel
Strand 4
A
172 179anti-parallel
Strand 5
A
163 167anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
230 231first strand
Strand 2
A
236 237anti-parallel
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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
64 69first strand
Strand 2
B
74 79anti-parallel
Strand 3
B
84 89anti-parallel
Strand 4
B
172 179anti-parallel
Strand 5
B
163 167anti-parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
230 231first strand
Strand 2
B
236 237anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il